Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01936 ATGGGTTCGGCGAGCACTGACAACGTGGGGTTGTCGGCGACGACGAGCAGCGCCGGGAAGAGCCAATTCTCGGAGATAGCGAGTGGGAGCATCGACAGTGAAGGGTATCTTCCGGTTCCTCTTCCTTCCCCTGATGGGCAGATTCTGGAAAGACCGAACTTGAAGGTGTTCAGTTTCGGAGACCTGAAATCTGCGACGAAAAGTTTCAAGTCTGATACATTGCTGGGTGAGGGTGGGTTTGGGAAAGTTTACAAAGGATGGTTGGATGAGAAGACCCTCTCCCCTGCCAAAGCTGGTTTCGGAATGGTCGTCGCCATAAAAAAATTGAACCCCGAAAGCACGCAAGGCTTCCAGGAATGGCAGTCAGAAGTAAACTTTTTAGGAAGGCTTTCTCACCCCAACCTAGTTAAGTTATTGGGTTACTGTTGGGACGATGATGAGCTTCTTCTTGTGTATGAGTTCATGCCAAAAGGAAGCTTGGAGAATCATCTTTTCAGAAGAAATCCTAACATAGAACCAATTTCATGGAAAACCCGACTTAAAATAGCTATCGGTGCAGCTCGCGGATTAGCTTTCTTGCATGCCTCTGAAAAGCAAGTCATATACAGAGATTTCAAGGCCTCAAATATACTTCTCGATGGGAATTACAATGCAAAAATCTCAGATTTTGGTTTGGCTAAATTGGGACCTTCAGGGGGACAATCACATGTAACTACCAGGGTGATGGGTACATATGGTTACGCTGCTCCAGAATATATCGCAACAGGTCACTTGTATGTGAAGAGTGATGTTTATGGGTTTGGTGTAGTGCTGCTTGAAATACTGACAGGCATGAGGGCACTTGACACAAGACGGCCAACAGGGCAGCAGAACCTTGTTGAATGGACCAAACCTTGTCTTTCTTCTAGGAAAAAGTTGAAAACCATTATGGATGTTAAGATAGAGGGTCAATATTCACCCAAGGCAGCATTACAAGCAGCACAACTTACTCTAAAATGCTTAGAACATGATCCCAAACAACGTCCTTCTATGAAAGAAGTGGTTGAGGGATTGGAAGCAATTGAAGCTATCCATGAAAAGTCTAAGGAATCCAAAACCCACAACTCTCAGCACACTACTTCTCATCACCCTCATAGGCAGAGATTGGTGAAAGTATAAATGAATTTGTATAAAAAAACTTAAAAAAAAAACGCTAGAGACTCAGAGATTGAACAGTAATACGGTCCATTGAATAGGGTGTTGGGTCGTATGTCACTTAATAGATGTGATTTTTTGTTTTTCTTTTTGTTGTGTTGGTTGGAAAGAGAGAATTCCACGAGCCTTTTTACATGTATGATTTTTTTGTTGAATTATTCACATTTTTATAAAGTGGGAAAATATTTGGTACTTGCCATTAGGGAACACAGTTATATTATGTTACTTTTTTTTTCTCTAAACGAAAAGTTGTTTGGC 1452 0.4208 MGSASTDNVGLSATTSSAGKSQFSEIASGSIDSEGYLPVPLPSPDGQILERPNLKVFSFGDLKSATKSFKSDTLLGEGGFGKVYKGWLDEKTLSPAKAGFGMVVAIKKLNPESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPISWKTRLKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGMRALDTRRPTGQQNLVEWTKPCLSSRKKLKTIMDVKIEGQYSPKAALQAAQLTLKCLEHDPKQRPSMKEVVEGLEAIEAIHEKSKESKTHNSQHTTSHHPHRQRLVKV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01936 385 Gene3D Transferase(Phosphotransferase) domain 1 155 379 - -
Pste7g01936 385 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Pste7g01936 385 Pfam Protein tyrosine and serine/threonine kinase 72 350 IPR001245 GO:0004672|GO:0006468
Pste7g01936 385 CDD STKc_IRAK 75 354 - -
Pste7g01936 385 FunFam Serine/threonine-protein kinase BIK1 40 154 - -
Pste7g01936 385 Gene3D Phosphorylase Kinase; domain 1 53 154 - -
Pste7g01936 385 MobiDBLite consensus disorder prediction 361 385 - -
Pste7g01936 385 MobiDBLite consensus disorder prediction 1 21 - -
Pste7g01936 385 PANTHER OS01G0588500 PROTEIN-RELATED 26 355 - -
Pste7g01936 385 SUPERFAMILY Protein kinase-like (PK-like) 48 352 IPR011009 -
Pste7g01936 385 MobiDBLite consensus disorder prediction 371 385 - -
Pste7g01936 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pste7g01936 385 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01936 385 ProSitePatterns Protein kinases ATP-binding region signature. 75 108 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01936 Pste-Chr7 17663909 17670927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01936 45 351 Glycoside Hydrolase AT3G07070 50.649 5.30e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste7g01936 PK_Tyr_Ser-Thr 7e-49 CL0016