Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01934 ACAACACAATCGCTCACTCCTGTAAGATCCACATCCTCTCATATCACTAATTTTGCTTGGAATTTTTATCTACTTGCTTTACTAGTTCTAACAGGTGGTCTTTCTCAATTTCCTCATAAACAACAAGAGCCTCCGACAATTGCCCATGCGAGGCAAACAGAGCTCACTGAAGTGAAACCCCTAAGCTCCGTCACCGTCTGTCGCTTCGCCACTTCGCCGTGCGCTGTCACTGTTCTGTTCGGTGGTGCGTCCGTTTCTCGTTCTCCGCTTTCTTTCTCGGCGGCGTCTCTTCTCCGGTCCTCCATCTCTGACGTGGGGTCTCTTCTTCCTTTGCTTCGGCGTGAAATGTGTTCTTCGGCCGCCTTATGTGTTCTGCCTAACCAATTTATTCCATGGTCTACAACCAATACTGAATATGCTACGGTTTGCAAATTGGGTGCTGTTTTTAATAAAATGTACAGAAATACAAACAAAAGAAAACTTGCTCTCTCTTTTGCTGGGGATGATTATAAAGTGAGTATTAGTGCAATAAAATCAAGCCAAGATGTTTCTTATTTTCAAACAGAACAACAAGTAGGAACATGGGAAGAACCAGATACTGGCAGTGACAGTGAGTCTGAAGTTGAAGAATATGAGGAAGTTGAAGATGAGAATTTTGGATTTGAAAGTGATCATGAAGAGGAGGGAATGAAGACTTCAGTTGTTACTGATGTTAATGAAACTTCAAGTGACAACTATGAAGAACTTATAAAAAAAGCTTTTGGAACCAGAAGAAAAGCAATATTGCAACAGAATGTTACTCCTAACTTGGAAAAAATATCAACTGCAAAATGGAGCCCACTGCACACTCTTGTGCTATCAATGCAGATGAGTTGTGTTGATAAGCTTCTTGAAAATGGTGTTGGTATTGATTTACCTGATAAGGAAGGGCTTACTGCACTTCATAAGGCAATTATAGGTAAAAAAGAAGCTGTGATTAACCATCTTTTACGGAGAGGTGCAAGTCCTCATGTAAAGGATAAGGATGGAGCCACTCCACTTCATTATGCAGTTCAAGTTGGTGCCAAGATGACTGTGAAACTATTGATGAAGTACAAGGCCGATGTCAATGTTGAAGATAATGAAGGTTGGACCCCCTTGCATGTTGCCATTCAGAGCAGAGATAGAGATATAGCAAAAATTTTGTTAGTTAATGGTGCTGACAAGACAAGGAAAAATAAGGATGGAAAAACAGCCCTGGATCTCAGCTTATGTTATGGGAAAGATTTCAAGTCATATGACCTTGCCAAATTACTGAAGACAGTTCCAGGTGACAATGATATTGATCTATGATGTGGGATGAGATGCCTTCAGCCAGAACCAGGATTGAAGTTTCATTTGAATGCTGCTGCTAATTAGCAAGTAAATCATTCTCTTGACATTCATCCATCTTTGAAGATCCTCTGCTGATCTTTTTCAAAATGACGAAAGTTTTGATGGAACAATTCATTTTCCTTTTTTGTTGGTGAATAAATCTATTATGTCACTGATTACTTGGAATATTTTTGCAGCATAGCTCGACTTGAAAACAGTCTCCCGTCAAGGCCACATACATTGTGCAGATTATAAGTTGAGAATATTTGTGATCTAAAGACACAGTGCTTGGCAAATAGCTCTGTTATTATAGATGAACCGTTCAAGCCATTGTGATCTTTCTACATGATAATTATTTCAACTAATAACTGAATAACGTATGAATGCTCAATTTTTTATGATTAATTGTACAAGTATCATAAATTTTTGTTCTATACAAG 1793 0.3882 TTQSLTPVRSTSSHITNFAWNFYLLALLVLTGGLSQFPHKQQEPPTIAHARQTELTEVKPLSSVTVCRFATSPCAVTVLFGGASVSRSPLSFSAASLLRSSISDVGSLLPLLRREMCSSAALCVLPNQFIPWSTTNTEYATVCKLGAVFNKMYRNTNKRKLALSFAGDDYKVSISAIKSSQDVSYFQTEQQVGTWEEPDTGSDSESEVEEYEEVEDENFGFESDHEEEGMKTSVVTDVNETSSDNYEELIKKAFGTRRKAILQQNVTPNLEKISTAKWSPLHTLVLSMQMSCVDKLLENGVGIDLPDKEGLTALHKAIIGKKEAVINHLLRRGASPHVKDKDGATPLHYAVQVGAKMTVKLLMKYKADVNVEDNEGWTPLHVAIQSRDRDIAKILLVNGADKTRKNKDGKTALDLSLCYGKDFKSYDLAKLLKTVPGDNDIDL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01934 443 ProSiteProfiles Ankyrin repeat region circular profile. 342 374 - -
Pste7g01934 443 ProSiteProfiles Ankyrin repeat profile. 342 374 IPR002110 GO:0005515
Pste7g01934 443 SUPERFAMILY Ankyrin repeat 268 420 IPR036770 -
Pste7g01934 443 ProSiteProfiles Ankyrin repeat profile. 375 407 IPR002110 GO:0005515
Pste7g01934 443 Gene3D - 230 346 IPR036770 -
Pste7g01934 443 ProSiteProfiles Ankyrin repeat region circular profile. 309 341 - -
Pste7g01934 443 Gene3D - 347 434 IPR036770 -
Pste7g01934 443 ProSiteProfiles Ankyrin repeat region circular profile. 375 401 - -
Pste7g01934 443 MobiDBLite consensus disorder prediction 189 209 - -
Pste7g01934 443 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Pste7g01934 443 Pfam Ankyrin repeats (3 copies) 324 406 IPR002110 GO:0005515
Pste7g01934 443 SMART ANK_2a 276 305 IPR002110 GO:0005515
Pste7g01934 443 SMART ANK_2a 342 371 IPR002110 GO:0005515
Pste7g01934 443 SMART ANK_2a 375 404 IPR002110 GO:0005515
Pste7g01934 443 SMART ANK_2a 408 443 IPR002110 GO:0005515
Pste7g01934 443 SMART ANK_2a 309 338 IPR002110 GO:0005515
Pste7g01934 443 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 218 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01934 Pste-Chr7 17645120 17653922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01934 261 416 Ion Channels AT2G25600 29.487 2.38e-08 54.7