Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01933 CTCAAATGTGTGGGACCGAAAGGGGCGCACTAGCTCGGGTTGACATCCGTAGTTCCGGTTATGGGTGTGTCCCAAGTACCAGCGAACGACTATCTTAACGCGGTCAATTTGGTAAGTGCCGACAGGTTCTTGGCATGGGTGTGCCCCTCTCTACTGCCTCCCCATCTCGTTCCTCTTCCTTCAACCGTTATCAGTTTTCAGATTATGCAAGCAGTGACAGCAGGACTGTAACCACCAGCAGCGCTGGAGAGAGTTCGTTTTTGGAGATTCATACAAGGCGAGAATTGAATATCTTCACTCTTGGGGAGCTTAAATCTGCCACACAAAATTTCAAGCCTAACAACTTACTGGGTGAAGGGGGGTTTGGGAGAGTTTACAAAGGATGGTTAGATGAGATGACCCTCTCCCCTGCCAAACCTGGCTCCGGAATGGTCGTCGCCGTAAAAAAATTGGACCCCGAAGGCCTGCAAGGCCACGCTGAATGGCAGTCAGAAGTAAACTTTTTAGGAAGGCTTTCTCATCCCAACCTGATCAAGCTCCTGGGTTACTGTATTGAAGATACTGAGCATCTTATTGTGTACGAGTTCATGCCAAAGGGAAGCTTACACAATCATCTATTCAGAAGAATTCCTGACTTGGTACCACTTTCTTGGAACACTCGGCTTCAAATAGCTATTGGTGCTGCTCGGGGGTTAACTTTCTTGCATGCCTCTGAACCCCCTGTCATACACAGAGGTTTGAAGACCTCAAATATACTACTTGATGGGAATTGCAATGCAAAAATCTCAGATTTTGGCCTTGCTAAATTGGGTCCTTCGGATGTAGAATCACACGTAACTACCAGGGTCATGGGCACACTTGGTTATGCTGCTCCAGAATACGTAGCAACAGGCCACTTGTACGTGAAGAGTGATGTATACGTGTTTGGTGTAGTTCTGCTTGAAATACTGACAGGCATGAAGGCACTTGACAGAAATCGGCCAGCAATGCAGCAGAACCTGGTTGAATGGACCAAGCCTTATCTTTCTTCCAAGAAAATGTTGAAAACCATAATGGATGCTAAGATAAAGAGTCAATATTCACTCAAGGCAGCATGGCAAACAGCACAGCTTGTTCTAAAATGCCTAGAATCTGTTCCTGGACGACGTCCTTCTATGCAAGAAGTACTTGAGGGATTGGAAGCCATTGAAACTATCCCATAGTTTGGTTTATAATCATAATGATGGAACATGATAGAAGATGGTGGGAAAGGATCAATCATATTTTAGTACTTCCTTCTATATGCATCCTTGAAATCGGGTGCAGAGAATAGAATAAAATATTATATTTTATAAAATGTTTAATTTATCCTTATTTTATGTATTTTACTAGTGTTGAGGAATTGAATTTTCTACTTTTTCATCCTACTTGATATGCATGTGCATTAATGAAGTATGACTATTTTCAAAGAGGTGAGACAGACACTCTAGAAGATGTTGTCACAGTGGTATGGC 1493 0.4327 MGVPLSTASPSRSSSFNRYQFSDYASSDSRTVTTSSAGESSFLEIHTRRELNIFTLGELKSATQNFKPNNLLGEGGFGRVYKGWLDEMTLSPAKPGSGMVVAVKKLDPEGLQGHAEWQSEVNFLGRLSHPNLIKLLGYCIEDTEHLIVYEFMPKGSLHNHLFRRIPDLVPLSWNTRLQIAIGAARGLTFLHASEPPVIHRGLKTSNILLDGNCNAKISDFGLAKLGPSDVESHVTTRVMGTLGYAAPEYVATGHLYVKSDVYVFGVVLLEILTGMKALDRNRPAMQQNLVEWTKPYLSSKKMLKTIMDAKIKSQYSLKAAWQTAQLVLKCLESVPGRRPSMQEVLEGLEAIETIP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01933 355 Gene3D Transferase(Phosphotransferase) domain 1 152 354 - -
Pste7g01933 355 SUPERFAMILY Protein kinase-like (PK-like) 46 349 IPR011009 -
Pste7g01933 355 ProSitePatterns Protein kinases ATP-binding region signature. 72 105 IPR017441 GO:0005524
Pste7g01933 355 CDD STKc_IRAK 72 351 - -
Pste7g01933 355 Pfam Protein tyrosine and serine/threonine kinase 70 347 IPR001245 GO:0004672|GO:0006468
Pste7g01933 355 Gene3D Phosphorylase Kinase; domain 1 26 151 - -
Pste7g01933 355 FunFam Serine/threonine-protein kinase BIK1 33 151 - -
Pste7g01933 355 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 152 354 - -
Pste7g01933 355 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01933 355 PANTHER OS01G0588500 PROTEIN-RELATED 32 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01933 Pste-Chr7 17641396 17644588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01933 30 355 Glycoside Hydrolase AT3G07070 45.872 2.34e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste7g01933 PK_Tyr_Ser-Thr 5.1e-48 CL0016