Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01931 GCAAAATCCCAGTGGGAGGGTCATTCCACGTTGTCCAAGGATCATCGTGTTGGGAAGATGACCCGACAGGCCAAAAAATCAATACCCCTCGCGAAGCACATTCATCAGTGGTAGCATTACTTTGTCCGAGGAAGCCTCTTGAAATCTAACATAAATTCCATTTAAAAATAGTAATTGTTAGAGACGGGTATTTGTAATGTATAGATGAGTGACATTTTGATTTTATATGAGTAGCACGTGCAGGAGGTGAAAGCAGTAAAAGAGAAGGGAGTAAAAGGTAAATATGAATGAAAGAGGATATGATGATAGTTGCTTGTGTTCTGCATAGAAGAGGCTTGTAGCAACAATGTCAAAACTAACCATTCTTGTATTCACGCTCATGGCTTCACAAGTAACTAGTTTATTTTCTCCATCACCTCCAGCCGCGCCATTTTACGAATCAGACCCTTCCCCACGCGCCGACCAATGGCTCTCCGCCCACGCCACCCACTACGCAGCCTCCGAGGCGTTCGGCGGCGCGTGCGGCTACAGCGAGCTCCCCAGCGGAATGGCCAGCGCCGCCCTAAGCGAGGCACTCTTCGGGCGGGGCCAGATCTGTGGGGCCTGCTTCGAGCTGCGGTGCCGGGAGGAGGAGTCCGACTTCGACCGGCGCTGGTGCATCGGCGGGGCCACCGTGGCGGTGACAGCGACCGACTTCTGCGCCCCAAACTACGGGTGGGACGCGGAGAGCCTGGGGGGACATTGTAATCCTCCGAAGCAGCACTTCGTTCTCCCCATTCAAGCATTCGAGAAAATCGCAATCTGGAAAACTGGCACCGGCAACATGCCCGTCGACTATCGCAGGGTAAGGATGGCACCTGGTGAAGATTTAACGAAGCAAAAGTTTGGTTTGAAAACCTCAAAAAGCTGCAAGGCGCGGGAATTTGCTAAGGCATGTGAAAAGTTCAGCGGTCCAAATGAAAGCAAGGTAGGTGAGACGAATGCCAATGGGGTTGTGCCACGTGACACGATCTGGACAAGGCTAAAAGCTTATGGAATGGATGCTCTAGATGCAGTGTTTGTTGGGGAGATTGACAATCTTGATCTAGGCGGATCTTTTGAAGTGTTGGTTCCACTTAAAGCTCCTAAGATAAAATGCAAAAAGGAAGGAGGGATCCAGTTTACAATGAGTGGTTCAGGAATATTCATATCGGTACTGATTAGTAATGTGGGTGGCATGGGAGACATAGTGGGTGTGAAGGTGAAGGGTTCAAAAACTGGATGGCTTCCTATGGGTAGAAACTGGGGCCAGAATTGGCACATTAATGCATTATTACAGAACCAACCTCTTTCGTTTGAGGTTACAGGTAGTGATGGGATAACTGTTACATCTTACAATGTTGCTCCCAAGGATTGGAACTTTGGACAATCTTTTCAAGGCAACCAATTTCAATCTTGACATCCACAAATATAATGGGACTATTCTCCTTCCTTTTTCCTTCTATAAAAGTTTTGTCACAATGGGGGCATCTACACATGCATCTTCTCCAGGTCATGAATCATAAGATATTCTTTCCAGATGCTAAGGCTGTATTAAGTTCCAAA 1584 0.4773 MSKLTILVFTLMASQVTSLFSPSPPAAPFYESDPSPRADQWLSAHATHYAASEAFGGACGYSELPSGMASAALSEALFGRGQICGACFELRCREEESDFDRRWCIGGATVAVTATDFCAPNYGWDAESLGGHCNPPKQHFVLPIQAFEKIAIWKTGTGNMPVDYRRVRMAPGEDLTKQKFGLKTSKSCKAREFAKACEKFSGPNESKVGETNANGVVPRDTIWTRLKAYGMDALDAVFVGEIDNLDLGGSFEVLVPLKAPKIKCKKEGGIQFTMSGSGIFISVLISNVGGMGDIVGVKVKGSKTGWLPMGRNWGQNWHINALLQNQPLSFEVTGSDGITVTSYNVAPKDWNFGQSFQGNQFQS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01931 363 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 279 358 IPR007117 -
Pste7g01931 363 Gene3D - 269 361 IPR036749 -
Pste7g01931 363 Pfam Lytic transglycolase 71 164 IPR009009 -
Pste7g01931 363 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 56 167 IPR007112 -
Pste7g01931 363 PANTHER EXPANSIN-A15 16 361 IPR002963 GO:0009664
Pste7g01931 363 SUPERFAMILY Barwin-like endoglucanases 40 167 IPR036908 -
Pste7g01931 363 SMART dpbb_1 70 164 IPR007112 -
Pste7g01931 363 Gene3D - 26 168 IPR036908 -
Pste7g01931 363 PRINTS Expansin signature 130 147 IPR002963 GO:0009664
Pste7g01931 363 PRINTS Expansin signature 65 79 IPR002963 GO:0009664
Pste7g01931 363 PRINTS Expansin signature 147 160 IPR002963 GO:0009664
Pste7g01931 363 Pfam Expansin C-terminal domain 270 347 IPR007117 -
Pste7g01931 363 CDD DPBB_EXPA_N 40 168 - -
Pste7g01931 363 SUPERFAMILY PHL pollen allergen 266 357 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01931 Pste-Chr7 17632771 17642044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01931 255 363 Expansin Gene Family AT3G03220 67.890 6.48e-50 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01931 7 17632771 17642044 Pste7g01931 7 17632771 17642044 ECH
Pste7g01931 7 17632771 17642044 Pste8g01538 8 8670037 8671708 PCT