Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01928 GCTTCTAGTGGGTGGATTTTTATCCATGCAGCAGTTGATTGAGGAGGGGGATCAACATGGATTTAATAGATCACAGGATGGTCCTCCAGTAGGAAGTGGAGTATCTTTGAGTTCTGGAGTGCATTCTGTTACACATATTCAACTTAATGACCAGTTTTCTTGCGGGAGTGACTATGCTCTGAAGGTGAGGAAACCATATACTATTACGAAACAGAGAGAGAGGTGGACAGACGAAGAACATAAGAAGTTCCTAGAAGCTTTAAAGCTGTATGGTCGGGCCTGGCGACGTATTGAAGAGCATGTTGGCACAAAGACTACTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTTACTATTCGATTCTAATAATCATTCTCTGCCATATTTTCTACTTACATCAGACTAAAGAGTTTGATGACCCTAGGATATCCAAAGTGCCACCTTCTTTGGGATTGAAGGGTTCCTCTGATTGTGTTCTTCGCGACCCTACTGGGAACAATACAAACACAGTAGAGTCAATTGAAATTCCTCCTCCTAGACCAAAACGAAAGCCAATGCATCCTTACCCTCGTAAGCTAGTTGAGACTCCTAATAAGGAAATTTCGATCCCACAACAACTTATCAAGTCATCAGATTTTGATCTAGAAAACCAATCTCCAAAATCAGTATTATCAGGAGTTGGCTCAGACAGCCTTGGCTCCTATGATTCAGACACACCAAATGGAAGTTTGTCCCCCATGTCATCCATTAGTGGTGTCTATACAAGCGGTTTTACTCGCGCTGAACCCAAGATAACATCTGAGGAAGCTGGGTTAAATGTTGATTCAGCTCATGATGAGAAACCTCTTATGAAATTCAAGCTTCCTCCAAATGAAAGTATTTCCATCAAAGAAGACACAGCAGAAGAATCTTCTCGTCGGACCTTGAAGCTTTTTGGAATGACACTATTTGTAATAGATATCTGCAAACCATCTTCAACCATTGAGGCGTGCAAACCAACACCTCTAAACATACGCATGCAATCACTTAGCAAGGGGGATGGAAAATTGGAACTTCTCGGCCACCTTACTCCAAGTGAAACATCAGCCGTATCCCAGCTTAAGATGAGGATGAGACCCGAAACATGTGAGGAAGGGTTTGTGCCATATAAAAGGTGCATGGCAAGGAGAGAGAACCAATCTTCGTTCGTTGAGACAGCTGATAATAGAGAAGGGCAATGCATCAACCTTTCCTTGTAGCTTTACCCCAATGGGGTTTTCTTCAGAAGTGTTCCCTTTGAGATGATGAGCTGTAACGATTACTGGATGAGCTGGCATGGGATAGGGAGGAAAAAAAGGGAGTTGAAAATTTTGACATTTTTGTTGCACTGCACATTCTCCAATTGTTCAAGTCCGTGAACCTGCCTTTTGTATTTTTTGACTTTCAAGTTTCAACTGTGAATTATATCTGATGTCTTTCCTTTCAACTTTTTATGCTCCTGATGAGTATACCAAGTGTAAGTCACATACTTTTGCA 1526 0.4155 MQQLIEEGDQHGFNRSQDGPPVGSGVSLSSGVHSVTHIQLNDQFSCGSDYALKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTTVQIRSHAQKFFSKVYYSILIIILCHIFYLHQTKEFDDPRISKVPPSLGLKGSSDCVLRDPTGNNTNTVESIEIPPPRPKRKPMHPYPRKLVETPNKEISIPQQLIKSSDFDLENQSPKSVLSGVGSDSLGSYDSDTPNGSLSPMSSISGVYTSGFTRAEPKITSEEAGLNVDSAHDEKPLMKFKLPPNESISIKEDTAEESSRRTLKLFGMTLFVIDICKPSSTIEACKPTPLNIRMQSLSKGDGKLELLGHLTPSETSAVSQLKMRMRPETCEEGFVPYKRCMARRENQSSFVETADNREGQCINLSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01928 407 MobiDBLite consensus disorder prediction 1 27 - -
Pste7g01928 407 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
Pste7g01928 407 FunFam protein REVEILLE 6 isoform X1 66 114 - -
Pste7g01928 407 SMART sant 63 111 IPR001005 -
Pste7g01928 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Pste7g01928 407 PANTHER SWI/SNF COMPLEX-RELATED 49 339 - -
Pste7g01928 407 MobiDBLite consensus disorder prediction 150 244 - -
Pste7g01928 407 Gene3D - 66 112 - -
Pste7g01928 407 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Pste7g01928 407 ProSiteProfiles SANT domain profile. 62 113 IPR017884 -
Pste7g01928 407 MobiDBLite consensus disorder prediction 155 169 - -
Pste7g01928 407 MobiDBLite consensus disorder prediction 172 189 - -
Pste7g01928 407 SUPERFAMILY Homeodomain-like 58 111 IPR009057 -
Pste7g01928 407 CDD SANT 66 109 IPR001005 -
Pste7g01928 407 MobiDBLite consensus disorder prediction 194 244 - -
Pste7g01928 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 62 111 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01928 Pste-Chr7 17628096 17631036 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste7g01928 Myb_DNA-binding 2.1e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01928 7 17628096 17631036 Pste7g01928 7 17628096 17631036 ECH