Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01927 AATTTAGCAGTGGAATTTGAATTTCCTTGCCTGCACAGCCTTTCTGCAGAACACAGGCCACAGGACAATAGGATAACCCATAGCATTGTGAGCAATGTGCTAAAGGAAGACAAAAAAGCCTCTGTGCAAAACGCAGTGCAGAGACAACACAAAGTTGGTCTTTCTGCTGCAAAACATTTGAATTCTATTACACCAGGTTTGGATGATACTAGTTGTTCTTCTTTTTTAGTGCATGAATTTGCTGTTACTGGTAAATATTGTGTTGGGGGAAACAAGTTCAGGGCCCCAATTGTAGTCATTTGCTACTTGCGGTTGAGAGACTATGGAAAGAGGGAAACAAAAATGTGTTCTTCGGCCGCCTTATGTGTTCTGCCTAACCAATTTATTCCATGGTCTACAACCAATACTGAATATGCTATGGTTTGCAAATTGGAACAACAAGTAGGAACATGGGAAGAACCAGATACTGGCAGTGACAGTGAGTCTGAAGTTGAAGAATATGAGGAAGTTGAAGATGAGAACTTTGGATTTGAAAGTGATCATGAAGAGGAAGGAATGAAGACTTCAGTTGTTACTGATGTTAATGTAACTTCAAGTGACAACTATGAAGAACTTATAAAAAAAGAGATTGAACAGCTTTTGGAACCAGAAGAAAAAGCAATATTGCAACAGAATGTTACTCCTAACTTGGAAAAAATATCAACTGCAAAATGGAGCCCACTGCACACTCTTGTGCTATCAATGCAGATGAGTTGTGTTGATAAGCTTCTTGAAAATGGTGTTGGTATTGATTTACCTGATAAGGAAGGGCTTACTGCACTTCATAAGGCAATTATAGGTAAAAAAGAAGCTGTGATTAACCATCTTTTGCGGAGAGGCGCAAGATGGAGCCACTCCACTTCATTATGCAGTTCAAGTTGTGCCAAGATGACTGTGAAACTATTGATCAAGTACAAGGCCGAAGTCAATGTTGAAGATAATGAAGGTTGGGCCCCCTTGCATGTTGCCATTCAGAGCAGAGATAGAGATATAGCAAAAATTTTGTTAGTTAATGGTGCTGACAAGACAAGGAAAAATAAGGTAATTTTGTTATACATTCTACTGCAGACTTCAGATATAAATTATTTAAATACATCAGGCTGAACATGTGTTATTATCATTCTTTAATTCACATTGTTTGACTATTCTTTCTGTTATATTTTTAATCCTTTTGGGCTATGCTGCTATTCTCCATTGAAATTACTGTTATGAAATGTCTATTCTCCATTGACTACGAGGATTATGAAATATTAAACCATAATTCGTAAATATTAACGATGGAAGTAAATAGGATGTGAACAAGTTATAACTTAATATATCCAGGACAAATTTGTGTAGCTTACCATGAGTTAATATCCCAAAATCTTGTTGCAATAATGCAGTTGATACGATATCGATATT 1440 0.3667 NLAVEFEFPCLHSLSAEHRPQDNRITHSIVSNVLKEDKKASVQNAVQRQHKVGLSAAKHLNSITPGLDDTSCSSFLVHEFAVTGKYCVGGNKFRAPIVVICYLRLRDYGKRETKMCSSAALCVLPNQFIPWSTTNTEYAMVCKLEQQVGTWEEPDTGSDSESEVEEYEEVEDENFGFESDHEEEGMKTSVVTDVNVTSSDNYEELIKKEIEQLLEPEEKAILQQNVTPNLEKISTAKWSPLHTLVLSMQMSCVDKLLENGVGIDLPDKEGLTALHKAIIGKKEAVINHLLRRGARWSHSTSLCSSSCAKMTVKLLIKYKAEVNVEDNEGWAPLHVAIQSRDRDIAKILLVNGADKTRKNKVILLYILLQTSDINYLNTSG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01927 380 Gene3D - 200 302 IPR036770 -
Pste7g01927 380 ProSiteProfiles Ankyrin repeat region circular profile. 328 354 - -
Pste7g01927 380 Pfam Ankyrin repeats (3 copies) 284 359 IPR002110 GO:0005515
Pste7g01927 380 ProSiteProfiles Ankyrin repeat profile. 328 360 IPR002110 GO:0005515
Pste7g01927 380 ProSiteProfiles Ankyrin repeat region circular profile. 269 294 - -
Pste7g01927 380 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 144 360 - -
Pste7g01927 380 SUPERFAMILY Ankyrin repeat 227 360 IPR036770 -
Pste7g01927 380 Gene3D - 303 370 IPR036770 -
Pste7g01927 380 SMART ANK_2a 236 265 IPR002110 GO:0005515
Pste7g01927 380 SMART ANK_2a 269 299 IPR002110 GO:0005515
Pste7g01927 380 SMART ANK_2a 328 357 IPR002110 GO:0005515
Pste7g01927 380 ProSiteProfiles Ankyrin repeat profile. 269 301 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01927 Pste-Chr7 17621488 17625731 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01927 221 354 Ion Channels AT2G25600 29.496 4.05e-08 53.5