Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01883 ATGATGCCGGAGACTGAGAGTGAGAACGAGCGGAACCACCCGAGAATAGAACCGCCGAACAACCTCCGATGCCGGCGGACGGACGGCAGGTCATGGCGGTGCCACCACTGGCGGATTCATGACCATAAGTACTGCGAGAAACATTTCCTTACCTACGCAGCAAAGTCCTTTAACTCCGAACCGAGCAAGAAGAAGAAAAAACCTAAGCTTTCTACTTCTTCCGCTTCCGATTCGGCGCAAAGAGACAATGCGAAGAAGAAGATTTCGAAGAGGCTTCGAGAGCGAGACGAAGCGACTGTTCCTGTTCCGCAGAGAACCAAAAACAAGAAGGTGAAACTCGAACCGGAACGAGAATCTCCTAAGGAGGAAGTGGCGCCGTTACTGGACAGGAAATCCAGAAGCAGAGAGAGGATCAAGCAATTGCTCGATCAATTCGATGAAGATTTTGATTTCGAAGACGAAAAATCGGTCAAAACAACGAGGACGAAGTCTTCTTCCTCCTCCAAGTCCAACGGCGCGAAGCCGAGAGCCTCTGTCTCGGACTCTCAGATGTGTCATCAGTGCCAGAAAAGCGATAGGACCGTTGTTCGTTGTCAGAAGTGTTGCAAACGATTTTGCATCCCTTGCATTCGGAGATGGTATTCACAAATGTCCAAGGAGGAAATAGCAGAATCTTGCCCATATTGTCAAGGCAATTGTAACTGCAAGGCATGCTTACGTAGAAAAGATGTAAATGTGGATTCTGGAGATTTAGGAGTGCCCCAGAATGAAGATGAAAAGATTCAACATTTGAAGCATTTAGTGCAAGCATTATATCCTTTTCTGGAACAATTTAATCACGAGCAGCAGTTGGAAATGGAGATGGAAGCAAAAATTAAAGGGATATTGCTTTCAGATGTAGAAATTAACCAAATTGTTTGTTCCAAATATGAACGCATTTATTGCAATAATTGCAAAACCTCTATTATTGATTTTCATCGGAGCTGCCCCAAGTGTTCTTATGATCTTTGCCTTACTTGTTGCTGGGAAATTCGTGGAAATGTCTTGCCAGGGGAGCAGCGCATTGACGTTTCTAATGCTCATTCACATTGTGGAGAGCCTTTGGATTGGCACTCATGCAAGAAAGAATTGTCAGACATTTGTCTTGAACCAAGTTCCAAGAGTTCTGTGAGACCAAAGCGATTGTGGAGGGCTATGAAAAATGGTGCAATCCCCTGTTCACCAAAGAATAACGATGGTTGTGGATATGGATATCTTGAGCTGAAGTGTATATATCCTCAAGATTGGATTTCAAATTTAAGGGAAAAAGTGAAACAATTAATCAAAGTACATGGATTAGAAGATATTTGCACAGTTTCTGCACAGTGTAATTTGTGCTTCAAATCTCATGAAATTAAGCCCATCAATGAGAACTTGCGAAGAGCTGCTAATCGAGAAGGCTCAAGTGACAACTATTTGTATTGTCCTTCAGCTAGTGATGTTGAATGTGGGGATCTTGAACATTTTCAGGGGCACTGGATTAAGGGAGAACCAGTTATTGTAAGGAATGCTCTTGAGTTAACCACTGGATTGAGCTGGGAGCCAATGGTAATGTGGCGTGCAATGCGTGAATTGACTTATCATGGTTCCAAACATTTGAATGTTAAAGCCATTGACTGCCTAGATTGGTGTGAGGTTGAAATAAATATACATAAATTTTTCAAGGGATACTCAGAAGGTCGTACTCATAGTGACTCCTGGCCTGAGATGCTCAAGCTAAAAGATTGGCCTCCATCTAATCTATTTGAGCAGAGGTTACCGCGCCATGGTATGGAGTTTATTAGTGCGCTACCCTACAAAGAGTATACACATCCTCGCACTGGTTTTCTTAACATGGCCACAAAGCTACCAAAAAAGTCTTTGAAACCTGACTTGGGGCCAAAGACATATATAGCATATGGCTTTGCTGAAGAGCTTGGATATGGAGATTCTGTGACGAAGCTTCACTGTGATATGTCAGATGCGGTATGTAAAATTCACTTAATAGAGATCTGA 2034 0.4302 MMPETESENERNHPRIEPPNNLRCRRTDGRSWRCHHWRIHDHKYCEKHFLTYAAKSFNSEPSKKKKKPKLSTSSASDSAQRDNAKKKISKRLRERDEATVPVPQRTKNKKVKLEPERESPKEEVAPLLDRKSRSRERIKQLLDQFDEDFDFEDEKSVKTTRTKSSSSSKSNGAKPRASVSDSQMCHQCQKSDRTVVRCQKCCKRFCIPCIRRWYSQMSKEEIAESCPYCQGNCNCKACLRRKDVNVDSGDLGVPQNEDEKIQHLKHLVQALYPFLEQFNHEQQLEMEMEAKIKGILLSDVEINQIVCSKYERIYCNNCKTSIIDFHRSCPKCSYDLCLTCCWEIRGNVLPGEQRIDVSNAHSHCGEPLDWHSCKKELSDICLEPSSKSSVRPKRLWRAMKNGAIPCSPKNNDGCGYGYLELKCIYPQDWISNLREKVKQLIKVHGLEDICTVSAQCNLCFKSHEIKPINENLRRAANREGSSDNYLYCPSASDVECGDLEHFQGHWIKGEPVIVRNALELTTGLSWEPMVMWRAMRELTYHGSKHLNVKAIDCLDWCEVEINIHKFFKGYSEGRTHSDSWPEMLKLKDWPPSNLFEQRLPRHGMEFISALPYKEYTHPRTGFLNMATKLPKKSLKPDLGPKTYIAYGFAEELGYGDSVTKLHCDMSDAVCKIHLIEI 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01883 677 MobiDBLite consensus disorder prediction 161 178 - -
Pste7g01883 677 MobiDBLite consensus disorder prediction 1 26 - -
Pste7g01883 677 ProSiteProfiles WRC domain profile. 18 62 IPR014977 -
Pste7g01883 677 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 59 669 IPR045109 GO:0032454|GO:0033169
Pste7g01883 677 MobiDBLite consensus disorder prediction 156 178 - -
Pste7g01883 677 ProSiteProfiles Zinc finger RING-type profile. 185 230 IPR001841 -
Pste7g01883 677 Gene3D Cupin 486 675 - -
Pste7g01883 677 MobiDBLite consensus disorder prediction 80 131 - -
Pste7g01883 677 SUPERFAMILY Clavaminate synthase-like 493 669 - -
Pste7g01883 677 MobiDBLite consensus disorder prediction 58 131 - -
Pste7g01883 677 Pfam WRC 19 57 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01883 Pste-Chr7 17231434 17235792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01883 23 49 GRF Transcription Factor Family AT5G53660 62.963 7.44e-06 47.0