LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g01843	ATCAAAACCAAAACCAAAACCAAAACCAAAACCATGGGAAGAAGTAAGCATATCTCTCTCTCTCTCTCTCTCTCTCTAAATCTGAATGCAACAAGTAGATGACCAAGTTGGCCGGAAAAGACGCCTTCCACCTCCGCGTGAGGGTGCACCCCTTCCACGTCCTCCGCATCAACAAAATGCTATCGTGCGCCGGTGCCGACAGGCTCCAGACTGGGATGAGGGGTTCCTTTGGTAAACCCCAGGGCACCTGCGCCAGGGTTAATATTGGTCAGCTCCTGCTTTCTATCAGGTGTAAGGATTCCAACAGTCACCATGCTCACCAGGCCCTTCCTCGCGCCAAATTCAAGTTCCCTGGCCGCCAGAAGATCTTTCTCAGCACTACCTGGGGATTTACAAAGTTCAGTAGAGCTGACTATTTCAAGTTCAAGTCTGACAACAGACTTGTGCCCCATGGGGTCAATGCCACGGTTCTTGGATGTCACGCTCCTTTGGCAAATCGTAAGCCTGGATGAGCTTTCTTGTCAGCTACTGCTTAGGTCATTTAGCTGTAGGAAATTAATTCAATAGGAGATGTTCCTGTTGATTACGGTCTGAACTGTAACTATTAAAAATATTGTTTCAATCTGTGTTGTAACTGTTGTTAGAAAACATCAGAATTATGTATCTGTCTTTACAATGTTTTAGGGGCTTCAAATATGCCCCTTTAATGTATTTAAATCCCATTATTTTCTGTCAGTTTGAACAGTGCGAAAATAAATATATATGGTCTTTATTGTG	777	0.4427	MTKLAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGSFGKPQGTCARVNIGQLLLSIRCKDSNSHHAHQALPRAKFKFPGRQKIFLSTTWGFTKFSRADYFKFKSDNRLVPHGVNATVLGCHAPLANRKPG	137

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g01843	137	Pfam	Ribosomal protein L16p/L10e	6	90	IPR016180	GO:0003735\|GO:0005840\|GO:0006412
	Pste7g01843	137	CDD	Ribosomal_L16_L10e	1	90	IPR016180	GO:0003735\|GO:0005840\|GO:0006412
	Pste7g01843	137	ProSitePatterns	Ribosomal protein L10e signature.	33	54	IPR018255	GO:0003735\|GO:0005840\|GO:0006412
	Pste7g01843	137	Gene3D	Ribosomal protein L10e/L16	1	103	IPR036920	GO:0003735\|GO:0005840\|GO:0006412
	Pste7g01843	137	SUPERFAMILY	Ribosomal protein L16p/L10e	1	101	IPR036920	GO:0003735\|GO:0005840\|GO:0006412
	Pste7g01843	137	PANTHER	60S RIBOSOMAL PROTEIN L10	1	137	IPR001197	GO:0003735\|GO:0005840\|GO:0006412
	Pste7g01843	137	Gene3D	-	104	137	-	-
	Pste7g01843	137	FunFam	60S ribosomal protein L10, putative	100	137	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g01843	Pste-Chr7	16954292	16955256	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g01843	1	137	Cytoplasmic Ribosomal Protein Gene Family	AT1G26910	75.912	3.07e-77	225

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste7g01843	7	16954292	16955256	Pste7g01843	7	16954292	16955256	ECH