Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01826 GCTAGAGCTACGTGTGAGGCTTCACCAATTCTTTGACACTCATCGTGGTCGTTTGGATCGTTATCATCGTCATATCACCAACTTCACCTCACTCACTCACTCCCTAACCTTTTTTCCTTCCAAACAAAGCCAGCCAAAACGATGTCGTATGTGCCTCCGCACCTCAGAAACGCCAGCCCCACCACCGTCGCCACCGCCAGAACCCACTCCGTAGCCCTAGATAACAACCACCACCACCACAAGCTCGCGTTCGCTTCCAACACCACCACCAATTGCTCTCCCTCCCTCTCCTCCTTCCACAATGCCTCTCGCCGGACCTCCGCCGCCCCTCCCTCGTCGCGGATTCTCGCCGTCCCCGACGCCGTCTTCCCCCAATGGCAACCCTCCGAACGCGTTTCGCGCATGACTCCCAACCAGATTGAAGAGGTCCGATCCCGACTTAATCTTGATGTCACTGTTGCATCTGACTCTCCTCCTGCACCTGCACCAATAGAATCCTTTACTGACATGTGTTTGCATCCGAGTATCATGAAGGATATTGCTTTCCATGAGTACACCAGACCAACTTCGATCCAGGCACAGGCCATGCCAATTGCTCTCAGTGGAAGGGATCTGTTGGGTTGTGCTGAAACTGGTAGCGGAAAGACTGCAGCGTTCACAATTCCCATGATACAGCATTGCTTGGCCCAATCTCCAATTAGGCGCAATGATGGTCCCTTGGCATTAGTTTTGGCCCCTACCAGAGAACTTGCTCAACAAATAGAGAAAGAGGTTAAAGCTTTTAGCAGATCTCTCGAGTCATTAAAAACTGCTATAGTTGTGGGTGGAACTAACATTGAAAAGCAGAGGTCTGAACTTAGAGCTGGAGTTGAAATAGCAGTTGCCACTCCTGGAAGATTCATTGATCACTTGCAACAAGGCAACACTTCCCTCTCTAGAATTTCTTTTGTTGTTCTAGATGAGGCAGATAGAATGCTTGATATGGGTTTTGAACCACAAATAAGAGAGGTAATGAGAAGTCTTCCAGAGAAGCATCAAACACTGCTGTTTAGTGCGACCATGCCTGTGGAGATTGAAGCATTAGCAAAGGAATACTTAGCTAGCCCAGTGCAAGTGAAGGTGGGGAAAGTGAGTAGCCCAACAACTAATGTTTCACAGAATCTTGTGAAAGTTTCTGAAAATGAGAAGATTGATCGGCTTCTAGATTTGCTTGTAGAGGATGCATCACAGGCTGAAAAATGTGGCCATCCATTTCCATTAACAATTGTTTTTGTTGAGAGGAAGACAAGGTGTGATGAAGTTGCTGAAGCATTGGTTGCTCAAGGATTATCTGCAGTTTCTCTTCATGGTGGTCGCAGTCAGAGTGAAAGAGAGGCTGCATTGCAGGATTTTCGGAGTAGCTCCACCAACATTTTGGTTGCCACTGATGTTGCATCTCGTGGCTTGGATGTCACAGGAGTGTCGCATGTCATCAATCTAGATCTTCCAAAGACCATGGAAGATTATGTACACCGGATTGGAAGGACAGGGCGTGCAGGATCAACTGGATTGTCTACTTCATTTTACACTGATCGTGACATGTTCCTTGTGGCAAATATAAGGAAGGGAATATCTGATGTTGCTAGAAGGAAGGAGAAAGAAGCAGCAGCCGCACAAAAAGAGGCAAATAGCGCCTTATCTAGACAATTAGGATTGGGAGCTGGTTCAATTAACATTGAAGATAAATATAAATTCATGATTACTGCCACAAACATTAAAAGAGAGGGTGCAGCGGATAGTGCCTGGGATGATTAATGAAGTGTTTGGTGCTTTCCATGTTTGATTGATGACAACTACTAATGCCTTTAAGTGCTGGTGCATAATTGACATGTTCTGCTCTTAGACTGAGTGAATTTATAGGTTTGTTGCTTCTAAGATGCTCTGAGGATGGAGAAGTTTCTAGTCAAGTTTCCAAGTCTTCATATTGTTTCACACCGTCATTGTAGCTAGCACACTTGTAACAAGTAGCTTGCTAGACGTTTAGGTGCTTTGTAGAGTTGTCATATAGGTAGTGCATCTTCTGTAATCCTAGAAATGCAAGTTTTCTTTAAATTTGTGTTGCCTCAAAAATACTTCTATTCGCACAGATATTTCATCATCATTAAATGTATATATCCAGCTTGCTGCATTTCGAGCACCTACGCTTTCGAGCACCTATGCTTCTTGTTAGCACTTTTGAG 2219 0.4516 MSYVPPHLRNASPTTVATARTHSVALDNNHHHHKLAFASNTTTNCSPSLSSFHNASRRTSAAPPSSRILAVPDAVFPQWQPSERVSRMTPNQIEEVRSRLNLDVTVASDSPPAPAPIESFTDMCLHPSIMKDIAFHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQSPIRRNDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMRSLPEKHQTLLFSATMPVEIEALAKEYLASPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLDLLVEDASQAEKCGHPFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGRSQSEREAALQDFRSSSTNILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIRKGISDVARRKEKEAAAAQKEANSALSRQLGLGAGSINIEDKYKFMITATNIKREGAADSAWDD 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01826 550 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 118 146 IPR014014 GO:0003724
Pste7g01826 550 SMART helicmild6 385 466 IPR001650 -
Pste7g01826 550 Pfam DEAD/DEAH box helicase 142 312 IPR011545 GO:0003676|GO:0005524
Pste7g01826 550 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 149 325 IPR014001 -
Pste7g01826 550 SMART ultradead3 137 340 IPR014001 -
Pste7g01826 550 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 271 279 IPR000629 -
Pste7g01826 550 Coils Coil 494 514 - -
Pste7g01826 550 Pfam Helicase conserved C-terminal domain 349 466 IPR001650 -
Pste7g01826 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 486 IPR027417 -
Pste7g01826 550 FunFam Probable ATP-dependent RNA helicase DDX41 81 326 - -
Pste7g01826 550 Coils Coil 204 224 - -
Pste7g01826 550 Gene3D - 331 515 IPR027417 -
Pste7g01826 550 Gene3D - 78 329 IPR027417 -
Pste7g01826 550 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 349 509 IPR001650 -
Pste7g01826 550 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 87 508 - -
Pste7g01826 550 CDD DEADc 129 326 - -
Pste7g01826 550 CDD SF2_C_DEAD 337 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01826 Pste-Chr7 16831455 16840006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01826 118 488 Eukaryotic Initiation Factors Gene Family AT1G72730 35.200 6.61e-69 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01826 7 16831455 16840006 Pste7g01826 7 16831455 16840006 ECH