Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01819 GTTAGCGGTGGTGTGTGTTATGTCTTCAAGTGTCGTGCATGCATTTTATGCATCTGTGCTTTGCATGCACACACACTCTCTCTCCTCTCTCCTCACTTTCTCTCTCTACAGAGACACACACGCCTCCGTTTCTCTCTCTAAAAACTCAGGTCAATTTCCATTGTCTCACGCTGATTTCAGTCGTTTCTCGCTGTTTTTTCTTCGTTGCCTTGCCTCTCTTCTTCTTCTTCAGCTAAGTGTTGACACGACCGATGATGCTGGATTTTTGGAATTTGGATTAATGGGTTCCGACATTTGCGTTGCGAATGGTTTATGCACTCACGAATGGAGAAAGGGCTGGCCTCTGCGATCTGGTGGATTCGCCCAACTCTGCTGCAAGTGCGGATTTATGGAGGAGTGGAAGGGTGACGTCCTTGACCCATTGTCTGCCTACGAGAATTCACTTTTCTGTAATAAATTCCACCGCCAACAAACTGGTTGGAGGGAATGTAACTTTTGCAACAAGCCTATCCACTGTGGATGCATAGTATCTAAATCTTTGTTCGAGTATCTTGACTATGGTGGTATAGGTTGTGTTAGCTGCGTAAATACTGCCCAACTTAGTATGATGAGGAATGCTGAAAATCCTACTGTGTCTGTTTCATCAATAAAAAATAATGATGGTGTTCGACATTCTACTCCTTTTGATGGAAGACTTATTATGGGTGGTGTTGATGAAGGAAAACTTATGCAATTCTGCAAAATTGTGGAAGCTAGTGAATCCAGCCGTTGGAATCAGGCTCAAAGAGATGGCGTCATTGCTCGTCATGGGCAAAACAATCAAGAAGCTAAATGTTCATTCAAGGAAGGGGATGTTGGATTTTCAAACGTGATGAAACCATCCATTCAGTCGTTAACATTTGCTACATTAGAAAATAATAGGTCAACATGGGAGATTAAAAACATGCATGAATCAAACGCACAACCATCTTTGAGTATGTATCTGGGAAATGCATCAGGGAACAATTCTGTCCTGTCTTCTGCTGGAGAGGTTGTAGAAGGAAGCCTCGAGGGAAAAGCATCTCCCTTTCATCAAGGGCAAAGATCTCGCCCTATATTTCCCAAACCGTTGAAGAGCGGGCTTACAGTGAATGTGGAAACAGATAAAGGTGCAATTTCTCAATCACGTGTTGCTCGGCCACCTGCAGATGGCAGGGGCAAGAATCAGTTACTTCCTCGATACTGGCCAAGGATTACTGATCAAGAGCTGGAGCGGTTGTCTGGAGATTTGAAATCCACTGTAGTACCATTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGCCGTCTTGTTCTCCCAAAGGCCTGTGCTGAGGCATATTTTCCTTCTATTTCACAATCTGAAGGTGTTCCTTTGCGAATGCAAGATGTTAAGGGCAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGGCCATGCAATTACGTGCTGGTGATACCGTGACATTTAGTCGGATAGATCCTGGAGGAAAACTTGTTATGGGTTTCAGAAAGGCATCAAATTCTACAGATACGCAGGATACCTCTGCATCTGCACAATCTAATTCAGCAAAGGGAACCACCTCTGCTGGAACTGAGAATTTGCAATCAGGAAGTAATCATTCTGAACTTCTTCATTCAATAAAGGGGAATGTGGAAACTCACTTAAATGGACATACAGAAGATCTGCTTTTGGGTACTGGAACTTCTGGGTTGCTTAAAACTGAAAATAATGAGATGACGAACAATAGTTCACTACAAAAAATTTCAGCCTTAGAGAAGAAGAGGACTCGTAATATTGGGCCTAAAAGCAAGAGGTTGCTTATTGATAATGAAGATGCTATGGAGTTGAAACTTACATGGGAAGAAGCACAGGATTTGCTTCGTCCTCCTCCTAGTGTCAAGCCAAGCATTGTCACAATTGAGGACCAAGTATTTGAAGAATATGATGAACCCCCAGTTTTTGGAAAGCGAACCATATTCAGTGCCTGTTCTTCTGGGGGGAAGGAACAATGGGCTCAATGTGATGATTGCTCTAAATGGAGAAAGCTTCCAGTTGATGCTCTTCTTCCTCCCAAGTGGACATGTTCGGAAAATGTTTGGGATTCAAGCAGGTGTTCTTGCTCTGCACCAGAGGAGCTATGCTCAAGGGAATTAGAAAATCTTCTGAAAACCAATAAAGGCTCCCCAGATTTTAAGAAGAGAAGAATTGTAGAAAGCAGCAAGTCAATCCAAGATCACGAGCCTTCTGGGTTGGATGCTCTTGCAAGTGCAGCAGTTCTAGGAGAAAATCTCCTTGACACTGCTGAATCATCAGCTGGAGCCACCACCAAACATCCTAGACACCGTCCTGGCTGCTCCTGCATCGTGTGCATTCAGCCTCCAAGTGGAAAGGGGAGACATAAGCCTACATGTACATGCAACGTGTGCATGACTGTGAAGCGCCGGTTCAAAACCCTCATGCTAAGGAAGAAGAAAAAGCAATCCGAACGGGAAGCAGATGCTGCCCAGAAAGATCAAGCTCTCCAAAAAGACGAGTTAGACACCAATGGAGCATCAAAAGATGATCCAAGTCAGTTGGAGAAAGAGGTAGGAATAAACACAAGTCAAGCTGAAGAGGGTGAATCCAGTGCTGGACAGATAGATCTGAATTCTCATCCCAACCGTGAAGACATGCAAGTGGATATCACTGCACTGAACATGTCTAGTCATCTTGGAACAACAACAAACCATACAGTCAGCGAGTATATGAATCAAAATGCCCTCAGAAGCTTTACTAATGAAGTGCAAACTGGTCAGAGTTCTTCTTTGCACACTCCTCAATCTAATGGCCAAGGTCAGAGATACTTCTCTGATGGAAGATGCTTTGCACCCATTATGTGGAACCAGGAAAGAAGAGATGAAGTACGCAGTCAATCCAGTCAAAGTCAAAACAATCTTTCTTAACAATTTCTTTCTTTTTATATTCATTTTTTTTCTTTACTGGTTTTTAACATTTCTCCTTACCTGCACTCAGTATATATTTTGCTTTCTTTTACAAAGAGGTGGTCAAAGAGAGTTCGTTCTTTTAAAAAATAATGTATTTTTTTTTTGTAACGTTTATTTTTTAAGCTTTTTTTTATATATTTTTTTCATGGAAGTGGG 3220 0.4245 MSSSVVHAFYASVLCMHTHSLSSLLTFSLYRDTHASVSLSKNSGQFPLSHADFSRFSLFFLRCLASLLLLQLSVDTTDDAGFLEFGLMGSDICVANGLCTHEWRKGWPLRSGGFAQLCCKCGFMEEWKGDVLDPLSAYENSLFCNKFHRQQTGWRECNFCNKPIHCGCIVSKSLFEYLDYGGIGCVSCVNTAQLSMMRNAENPTVSVSSIKNNDGVRHSTPFDGRLIMGGVDEGKLMQFCKIVEASESSRWNQAQRDGVIARHGQNNQEAKCSFKEGDVGFSNVMKPSIQSLTFATLENNRSTWEIKNMHESNAQPSLSMYLGNASGNNSVLSSAGEVVEGSLEGKASPFHQGQRSRPIFPKPLKSGLTVNVETDKGAISQSRVARPPADGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPSISQSEGVPLRMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLRAGDTVTFSRIDPGGKLVMGFRKASNSTDTQDTSASAQSNSAKGTTSAGTENLQSGSNHSELLHSIKGNVETHLNGHTEDLLLGTGTSGLLKTENNEMTNNSSLQKISALEKKRTRNIGPKSKRLLIDNEDAMELKLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDSSRCSCSAPEELCSRELENLLKTNKGSPDFKKRRIVESSKSIQDHEPSGLDALASAAVLGENLLDTAESSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKKQSEREADAAQKDQALQKDELDTNGASKDDPSQLEKEVGINTSQAEEGESSAGQIDLNSHPNREDMQVDITALNMSSHLGTTTNHTVSEYMNQNALRSFTNEVQTGQSSSLHTPQSNGQGQRYFSDGRCFAPIMWNQERRDEVRSQSSQSQNNLS 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01819 1000 CDD B3_DNA 423 524 IPR003340 GO:0003677
Pste7g01819 1000 Pfam CW-type Zinc Finger 690 732 IPR011124 GO:0008270
Pste7g01819 1000 ProSiteProfiles B3 DNA-binding domain profile. 425 526 IPR003340 GO:0003677
Pste7g01819 1000 FunFam B3 domain-containing transcription repressor VAL1 403 530 - -
Pste7g01819 1000 Coils Coil 845 865 - -
Pste7g01819 1000 Gene3D - 680 733 - -
Pste7g01819 1000 SMART B3_2 425 526 IPR003340 GO:0003677
Pste7g01819 1000 MobiDBLite consensus disorder prediction 881 907 - -
Pste7g01819 1000 ProSiteProfiles Zinc finger CW-type profile. 685 735 IPR011124 GO:0008270
Pste7g01819 1000 MobiDBLite consensus disorder prediction 947 970 - -
Pste7g01819 1000 Pfam B3 DNA binding domain 425 524 IPR003340 GO:0003677
Pste7g01819 1000 Gene3D - 403 530 IPR015300 -
Pste7g01819 1000 SUPERFAMILY DNA-binding pseudobarrel domain 423 525 IPR015300 -
Pste7g01819 1000 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 91 952 - -
Pste7g01819 1000 MobiDBLite consensus disorder prediction 947 968 - -
Pste7g01819 1000 MobiDBLite consensus disorder prediction 841 907 - -
Pste7g01819 1000 MobiDBLite consensus disorder prediction 378 397 - -
Pste7g01819 1000 MobiDBLite consensus disorder prediction 524 557 - -
Pste7g01819 1000 MobiDBLite consensus disorder prediction 844 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01819 Pste-Chr7 16770641 16778338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01819 88 913 B3 DNA Binding Superfamily AT2G30470 49.582 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste7g01819 B3 3.3e-17 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01819 7 16770641 16778338 Pste7g01819 7 16770641 16778338 ECH
Pste7g01819 7 16770641 16778338 Pste8g01593 8 9372901 9385227 PCT