Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01806 ATAAAACTCGTTATCTTCGTCCTATACATACTATTGTTTTGTATATGTATATGTATATATATAACTCTTCTTTAAACTCAAATCTGTCACATAAAACAAACAGTGCTCGAGTTTCTGAGACACCAACATGGAGTTTGTGCCAAATCAATGCCCTTTAATGGGTTCCTTTGGGAATTTCGTTGAGAAGGTCAAAAGTGTTGGTACCCTCTTCGCATCTGCCATCATTGGAAACATCTTTTCTGCGATCTTCACCTTCTGCTTTGCATTAGTGGGCACTTTGTTGGGGGCTCTGACTGGAGCCTTGATAGGCCAAGAGACAGAAAGTGGTTTCTTTCGAGGGGCTGCTATTGGTGCCATATCAGGAGCTGTTTTCTCCATAGAAGTGTTTGAATCTTCACTTATTGATGTTATTGCTAGCCTATTGAGTGGGAGACTAGTGCGTGAAAGAATAGGTCCAGCTATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAAATAAGCTTTGATGAGGTTCAAAACCTCTTTGACATTGGTGGCGCCAAAGGTTTACCAAGAGATTCGGTTGAAAAGATCCCAAAGATCACAATTACTAGTGACAATAATGTTGATGCTTCTGGGGAGAGAGTTTCATGTTCAGTTTGCCTTCAGGACTTTCAGCTTGGGGAGACTGGTAGAAGTTTGCCTCATTGCCATCACATGTTTCACCTACCTTGTATTGATAAGTGGTTGATTAAGCATGGATCTTGCCCATTATGCAGAAGGGATCTATAATTTTGTATATGCAAAGTACAAACCGTAAAAA 806 0.4069 MEFVPNQCPLMGSFGNFVEKVKSVGTLFASAIIGNIFSAIFTFCFALVGTLLGALTGALIGQETESGFFRGAAIGAISGAVFSIEVFESSLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEISFDEVQNLFDIGGAKGLPRDSVEKIPKITITSDNNVDASGERVSCSVCLQDFQLGETGRSLPHCHHMFHLPCIDKWLIKHGSCPLCRRDL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01806 215 FunFam NEP1-interacting protein-like 1 130 215 - -
Pste7g01806 215 Pfam YMGG-like Gly-zipper 45 81 IPR027367 -
Pste7g01806 215 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 16 214 IPR044523 -
Pste7g01806 215 ProSiteProfiles Zinc finger RING-type profile. 170 212 IPR001841 -
Pste7g01806 215 SMART ring_2 170 211 IPR001841 -
Pste7g01806 215 SUPERFAMILY RING/U-box 169 215 - -
Pste7g01806 215 CDD RING-H2_NIPL1-like 169 212 - -
Pste7g01806 215 Pfam Ring finger domain 169 212 IPR001841 -
Pste7g01806 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 215 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01806 Pste-Chr7 16654626 16656482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01806 18 215 C3H Transcription Factor Family AT5G66070 68.224 6.36e-97 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03177 1 14402612 14405170 Pste7g01806 7 16654626 16656482 PCT