Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01773 ATGTGCTCTTCATTTGTCACTTGTTCTGTGGCTTTTGGAAAAGAGCACGCTTATGTGGAACAGAGCAAAGAAAGAAAGTGCAACTTCCTCTGTTTTGCTCCCCTGTTTTGGCCTTATCATAAGCTTAGAATGGCACACCAAGAAATTTTCATTGCTCTATTGACTCTCATTGTTCTCTTTGTTAACGTGAACCTGCAAGGTGCCACTGCTGACTATGGTGGTTGGCAGAGTGCTCATGCCACTTTCTATGGTGGTGGTGATGCTTCTGGCACAATGGGTGGAGCATGTGGATATGGAAATTTGTACAGCCAGGGCTATGGAACTGATACTGTGGCTCTAAGCACTGCTTTGTTCAACAATGGCTTAAGCTGTGGATCTTGTTATGAAATGAGATGTGATGATGATCCAAGATGGTGCAAACCTGGCTCTATTATTGTCACTGCGACTAACTTCTGCCCCCCAAACCCATCTTTGCCTAACAACAATGGTGGCTGGTGCAACCCTCCTTTGCAACACTTTGATATGGCAGAACCTGCCTTCCTTCAAATTGCCGAATATAGAGCTGGAATTGTTCCTGTGGCCTTCAGAAGGATTCCTTGTGTGAAGAAAGGGGGAATAAGGTTCACCATCAATGGCCACTCTTACTTCAACCTAGTTTTGATCACCAATGTTGCTGGTGCTGGGGATGTGCGTTCAGTGTCCATCAAAGGGTCCAGAGCTGGGTGGCAATCTATGTCAAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCTACCTCAATGGACAATCCCTCTCTTTTCAAGTCACCACCAGTGATGGCAGAACTGTGATAAGCAACAATGTGGCACCAGCCAATTGGCAGTTTGGCCAGACTTTCCAAGGTGGCCAATTCTAGAAAAATTATTGCAATGGTGATAGAAAATAGTGTGAAAAAAAAAGTTTGTATACCTATTATTAATCACCTCATTGGAATAACCATTAAGTGTCATAATAGGTATTGATTCTTGTAACTGTGATTCTGAAAGGCCAGTGTTTTATTTTATTGGTCTAAAAAGTAGCCGAGGTGTTCATATAGCACCCGCTGGTCACTTCTCATATAATATTACATATATGGAGAGTTATGTGTTATCCTGTGTGTGGTGCTACTTTTCTTCTATCCAAGTTAATAATTATATTGATAA 1180 0.4254 MCSSFVTCSVAFGKEHAYVEQSKERKCNFLCFAPLFWPYHKLRMAHQEIFIALLTLIVLFVNVNLQGATADYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCDDDPRWCKPGSIIVTATNFCPPNPSLPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRIPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVRSVSIKGSRAGWQSMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVISNNVAPANWQFGQTFQGGQF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01773 297 FunFam Expansin 205 297 - -
Pste7g01773 297 Pfam Expansin C-terminal domain 206 283 IPR007117 -
Pste7g01773 297 CDD DPBB_EXPA_N 74 200 - -
Pste7g01773 297 SMART dpbb_1 110 195 IPR007112 -
Pste7g01773 297 PANTHER EXPANSIN-A15 55 297 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin/Lol pI family signature 74 89 IPR007118 GO:0005576
Pste7g01773 297 PRINTS Expansin/Lol pI family signature 280 294 IPR007118 GO:0005576
Pste7g01773 297 PRINTS Expansin/Lol pI family signature 242 256 IPR007118 GO:0005576
Pste7g01773 297 PRINTS Expansin/Lol pI family signature 114 132 IPR007118 GO:0005576
Pste7g01773 297 PRINTS Expansin/Lol pI family signature 188 204 IPR007118 GO:0005576
Pste7g01773 297 PRINTS Expansin/Lol pI family signature 92 110 IPR007118 GO:0005576
Pste7g01773 297 FunFam Expansin 64 201 - -
Pste7g01773 297 SUPERFAMILY PHL pollen allergen 202 294 IPR036749 -
Pste7g01773 297 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 215 294 IPR007117 -
Pste7g01773 297 Pfam Lytic transglycolase 110 194 IPR009009 -
Pste7g01773 297 SUPERFAMILY Barwin-like endoglucanases 74 223 IPR036908 -
Pste7g01773 297 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 93 205 IPR007112 -
Pste7g01773 297 Gene3D - 60 200 IPR036908 -
Pste7g01773 297 Gene3D - 205 297 IPR036749 -
Pste7g01773 297 PRINTS Expansin signature 105 119 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 204 216 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 251 272 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 280 296 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 216 237 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 144 154 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 132 143 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 180 193 IPR002963 GO:0009664
Pste7g01773 297 PRINTS Expansin signature 163 180 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01773 Pste-Chr7 16400823 16403436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01773 55 297 Expansin Gene Family AT2G40610 78.689 2.83e-147 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01773 7 16400823 16403436 Pste7g01773 7 16400823 16403436 ECH
Pste7g01773 7 16400823 16403436 Pste8g01595 8 9413371 9415103 ECH
Pste7g01773 7 16400823 16403436 Pste8g01595 8 9413371 9415103 PCT