Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01753 ATGGAGATGTCATTGTTAAAAATGATCATAAATAGCATATCTTCATTTTTGCATTTATCATTTTCGGGAAACATGAACTCTGAACCTGTTTCAAAGTATTACCAGAAGGCAGAGGAGATACTTAAGTTGTTGAAGCCAATCATTGATGTGATTGTTAATTCCGAGTTAGCTTCTGATGAAGGGCTTAATAAGATATTGGAAGAAATTGGTCTTGCTGTTAATGACTTAAAGGAGTATGTTGAGAACTGGCACCTATTGTCTAGCAAAGTTTACTTTGCTATGCAAGTTGAACCCCTGATATCAAGAATTCACACTTCAGGGCTCCATATTTTCCAGCAGCTGAAGGCTTCTAATCTTTGTCTCCCTGATGAATTAAGTTCTGAACATTTACAGCACTGTTCACAAAAACTTAAGCTTTTGGGACATGAAGAGACCTCATCAGTAATCAAGGAAGGTATTACAGAACAACTGGAAAATGTAGGACCCAATCCAGAAATCCTGACAAAAATTGCTGATAGCCTGGGCTTAAGGTCTAATCAGGAGGTTCTTATTGAGGCTGTAGCTCTTGAAAGATTGAAGGAGAATGCAGAACAAGCTGAAAAGAGTGAAGAAGCTGAATACATTGATCAAATGATTGCTGTTGTAACACGTATGCTTGAGCGTCTTGTAATGCTTAAGCAAGCACAGAGTAGCAGCCCAGTTCCAATACCTGCTGATTTTTGTTGCCCTCTTTCTTTGGAGTTGATGACTGATCCTGTGATTGTGGCATCGGGGCAAACATATGAGCGAGCTTTCATCAAGAACTGGATTGATCTTGGGCTTACTGTTTGTCCTAAGACACGTCAGACTCTGGCTCATACCAACCTAATACCTAATTATACTGTAAAAGCATTAATTGCAAATTGGTGTGAATCGAATAATGTGCAGCTGGTTGACCCCACAAAATCCCCAAATTTAAATCAAGCATCTGTCCTTCATGGGTATATGGAGCCTGGTACAACAAAGGAACCACCTGTTTTTGCTCATGCCAGGAGCAACCAGCCATCCTCACCTGAATCAGCACGTTCTCATTCTTTTAGTTCCCCAGGTAATAACCTAACTTCTGCTGGAATTCAGCGAGAGGGATCATCACCTTTGCATCCCCGTTCAACTTCAGAAGGCTCCTTAAGTGGTATGGCTAATGGGCAATATGTGGATCCTGTAAGAATATCTATTGCTGGTTTGGATGATAGGTCTGCTAGCTCAGATGAAAGCAGTTTGGATTCAGCTAGCCAACCATCAATGTCACCATCTAGAAGGGAGTCTTCCAGTGCCTTTAGCCCTGAACAATCTCAAACCCATACTAGGGCTGTTTCTGATTCCAGTGCACTTTCTACTGCAAATTTTCCTCAAGAAACACAAGGTGATGACAACAATGCTCCTCAGCTGTCTACAAGTCCAGGTGACAGTAGAGAGGCTTCTGGTGAATTAAATCCAGGGCCAGAAACTGCTGGTACTACTTCTGTGCCATCAGTGCATAGAGAACCTGAGTTCCCACCCCGATTGTTGGAGACAAGGTCTCGAAATCAAGCCATTTGGAGGCGGCCATCTGAGAGACTTGGTCCTAGGATAGTATCTTCTCCTGTTATTGAAACAAGAGCTGATCTTTCTGGTATTGAAGCCCAGGTTCGGAATTTAGTTGAGGGCTTGAGGAGCTCTGATCTTGATACTCAGAGAGAGGCAACAGCAGAACTCCGCCTTCTTGCTAAGCACAATATGGATAATCGAATTGCAATTGCAAACTGTGGAGCCATTACCTTATTAGTTGATTTACTTCGATCCACTGATACCACAATCCAAGAAAATGCTGTTACAGCACTTCTAAACTTATCAATAAATGATAACAACAAAACTGCAATTGCAAATGCTGGTGCAATTGAACCTCTGATTCATGTGCTTGAGACCGGGAGCCCAGAAGCCAAGGAGAATTCAGCTGCCACTCTTTTCAGCTTATCAGTGATTGAGGAAAACAAGATTTTCATAGGGAGGTCTGGGGCAATTGGACCACTTGTAGATTTATTGGGTAATGGAACCCCTAGGGGAAAGAAAGATGCAGCTACTGCTCTGTTTAATTTGTCAATATTTCATGAAAACAAGAATCGGATTGTGCAAGCTGGTGCTGTGAGGCACCTTGTGGAATTAATGGACCCAGCAGCTGGAATGACTGACAAGGCAGTGGCTGTCTTGGCAAATCTTGCTACAATTCCAGAAGGAAGAAATGCAATTGGTGACGAAGGTGGGATTCCTGTTCTGGTTGAAGTTGTTGAGTTGGGTTCTGCAAGAGGAAAGGAGAATGCAGCCGCTGCTCTTCTACATCTTTGCTTACATAGCCCCAGGTTTTTAAGCAAGGTGCTTCAGCAAGGAGCTGTGCCGCCATTAGTAGCTTTATCACAGTCGGGCACCCCTAGGGCCAAAGAAAAGGCCCAGGCTCTCCTTAATCAATTTAGAAGTCAAAGGCATGGGAATACTGGGAGGGGCTGA 2520 0.4302 MEMSLLKMIINSISSFLHLSFSGNMNSEPVSKYYQKAEEILKLLKPIIDVIVNSELASDEGLNKILEEIGLAVNDLKEYVENWHLLSSKVYFAMQVEPLISRIHTSGLHIFQQLKASNLCLPDELSSEHLQHCSQKLKLLGHEETSSVIKEGITEQLENVGPNPEILTKIADSLGLRSNQEVLIEAVALERLKENAEQAEKSEEAEYIDQMIAVVTRMLERLVMLKQAQSSSPVPIPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVQLVDPTKSPNLNQASVLHGYMEPGTTKEPPVFAHARSNQPSSPESARSHSFSSPGNNLTSAGIQREGSSPLHPRSTSEGSLSGMANGQYVDPVRISIAGLDDRSASSDESSLDSASQPSMSPSRRESSSAFSPEQSQTHTRAVSDSSALSTANFPQETQGDDNNAPQLSTSPGDSREASGELNPGPETAGTTSVPSVHREPEFPPRLLETRSRNQAIWRRPSERLGPRIVSSPVIETRADLSGIEAQVRNLVEGLRSSDLDTQREATAELRLLAKHNMDNRIAIANCGAITLLVDLLRSTDTTIQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLETGSPEAKENSAATLFSLSVIEENKIFIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIFHENKNRIVQAGAVRHLVELMDPAAGMTDKAVAVLANLATIPEGRNAIGDEGGIPVLVEVVELGSARGKENAAAALLHLCLHSPRFLSKVLQQGAVPPLVALSQSGTPRAKEKAQALLNQFRSQRHGNTGRG 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01753 839 Pfam Armadillo/beta-catenin-like repeat 669 706 IPR000225 GO:0005515
Pste7g01753 839 Pfam Armadillo/beta-catenin-like repeat 626 665 IPR000225 GO:0005515
Pste7g01753 839 Pfam Armadillo/beta-catenin-like repeat 587 624 IPR000225 GO:0005515
Pste7g01753 839 MobiDBLite consensus disorder prediction 328 394 - -
Pste7g01753 839 FunFam RING-type E3 ubiquitin transferase 539 834 - -
Pste7g01753 839 PANTHER U BOX DOMAIN-CONTAINING 29 827 - -
Pste7g01753 839 FunFam RING-type E3 ubiquitin transferase 235 310 - -
Pste7g01753 839 Coils Coil 179 209 - -
Pste7g01753 839 ProSiteProfiles U-box domain profile. 235 309 IPR003613 GO:0004842|GO:0016567
Pste7g01753 839 MobiDBLite consensus disorder prediction 411 485 - -
Pste7g01753 839 CDD RING-Ubox_PUB 237 289 IPR045210 -
Pste7g01753 839 Gene3D - 542 834 IPR011989 -
Pste7g01753 839 Pfam U-box domain 236 306 IPR003613 GO:0004842|GO:0016567
Pste7g01753 839 SUPERFAMILY ARM repeat 556 828 IPR016024 -
Pste7g01753 839 SUPERFAMILY RING/U-box 226 313 - -
Pste7g01753 839 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 596 638 IPR000225 GO:0005515
Pste7g01753 839 MobiDBLite consensus disorder prediction 343 392 - -
Pste7g01753 839 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 678 720 IPR000225 GO:0005515
Pste7g01753 839 SMART arm_5 539 583 IPR000225 GO:0005515
Pste7g01753 839 SMART arm_5 708 747 IPR000225 GO:0005515
Pste7g01753 839 SMART arm_5 748 788 IPR000225 GO:0005515
Pste7g01753 839 SMART arm_5 667 707 IPR000225 GO:0005515
Pste7g01753 839 SMART arm_5 585 625 IPR000225 GO:0005515
Pste7g01753 839 SMART arm_5 626 666 IPR000225 GO:0005515
Pste7g01753 839 SMART Ubox_2 239 302 IPR003613 GO:0004842|GO:0016567
Pste7g01753 839 MobiDBLite consensus disorder prediction 409 518 - -
Pste7g01753 839 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 314 IPR013083 -
Pste7g01753 839 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 719 760 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01753 Pste-Chr7 16278729 16282703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01753 196 839 U-box Gene Family AT2G23140 63.636 0.0 755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01753 7 16278729 16282703 Pste8g01604 8 9612249 9623222 PCT