Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01668 ATGAGGCAGGGGCGCGGAAGGAAGAAGCAACGAGGGAACAGACCCATTCCTGTTCCCCTCTATGCACACCCATCTTTCACCATCAATTTGGTTGAAAACACTTCTTCTTCTGTACAAAGCGTGAAGAAGAAACGTAGCACAGAAGCTACAAAGCAGGAGAAGGAGACATTATTACTATTGGACAAAGAAAATATTGGAGAGCAAAATCACCCGGAGGACCTTGGGGTTTCTGTTTCTCACCAGAGACTACGTGGTAGAAAAAGAAAACCGCTTCAGTATAAAGACCATGTGGGACTTCAAAACGACTCCTCAACGTGCCATCAATGCCAGAGGAATGACAAAGAGAGGCTTGTGAGGTGCAAGAGTTGTAAGCGAAAAGGGTTTTGCTTATCCTGTATAACAAATTGGTATCCTCATTTGGAAGAGAATGATATTGCTCAGGCATGTCCTGTGTGCTGTGGGAATTGCAACTGTAAAACATGCTTGATATCGGATGAACTTATTCAGAAACTAAAGGGCAAGACAAACACCAATGAAGACTACAAGTACGAACACGCTATGGATTTGCTGCAACTACTTCTTCCGTATGTAAGGCAATTAGATGATGAGCAAATGATTGAGAATCACACAGAAGCTAAGATACAAGGGCTCTCGGTCTCAGAGCTAAATATAGTCAAGGCAGATTTTGCAAAAGACGAGCGTGTATACTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGCACAAAATGCTCTTTCGACCTTTGTCTCATCTGTTCCCGTGAGCTTCGCAATGGGCAACTTGTAGGTGGTGCAGATCCAATTGAGTGGGAGTTTGTCTTTCAAGGTCGTGGTTACTTGCATGCTCAAAAAGAAACAAAAAAAGTCAAACAAAATGCATCAGCATTTGATGCTAAGCCCGAGATTCGTGAATGGTCAAGATCTGGGTGGCATGCAGAAAGTAATGGTAGCATTGCTTGTCCAAAAGGCAATGATGAATGTAACCATGGATTCCTTGAACTGAGAACCATATTAGGCAAGCATTTTGTCAGTATGATAGTGCATAAAGCCAATCGACTAGCAAGTGCATACAATCTTCAAGGTGTATATAAGAATCCTGACAATTTCTGTTCATGTTTGAGGCTTGATGGAAATACAGATGTTAGATATAATATGAGGAATGCTGCTTCCCGTGAAGATTCCAGTGATAACTATTTATACTGTCCTAGTGCTGTAGATCTACAGACCAAGGATTTAAGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTTAGCTGGGAACCACTTGTCATGTGGCGCGCATTCCGGCAAATAATTAACACTAAGCATGATCAACATTTGAATATGAAGGCAATTGATTGCTTAGATTGGTGTGAGGAAGAAATTAGTATTCACCAATTCTTTAGTGGCTATGCAAAAGGTCGTATGGATTGGCTTGGTTGGCCTCAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAATGTTTGCCTCGTCATTATGCTGAGTTCATATCTTCTTTGCCCTTCAAGGAATATGCAGATCCTCTCAGAGGTGCTCTTAACCTCGCTGTGAAGCTTCCTAAAAATTGTCTAATGCCAGACATGGGGCCGAAGACATATATTGCTTATGGGTTTCCTCAGGAGTTTGGCCGTGGTGATTCAGTGACCAAGCTCCATTGTGACATGTCTGATACAGTAAATCTGTTGACTCATGTTGCTGAAGTGAAATTGAACCCTAAGCAACTCACTGCCATTGAGGAGTTGAAACAAAAGCACTTTGAGCAAGACAGAAGGGAGCTACTTGATGATGATCAGGATGGAGATACTAAAGTTGGAAACAATTCATTTTCTATTAGAAGTTCATTGGACAAGCTAAATTATGTCCAAGTCATGGAAAATGAAGGTGCTCTTTGGGATATTTTTCGGCGACAGGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTCAAAGAGTTTAGGCATATTTATGGCGATCCTTTAAAGCAGGTTATTCACCCCATCCATGACCACACCTTCTATCTGACTATGGAGCATAAGAGGAAGCTTAAAGAGGAGTATGGAATTGAGCCCTGGACTTTTGTTCAGAAGTTAGGTGATGCTGTTTTCATTCCAGCTGGTTGTCCTCATCAAGTCAGAAATCTAAAGTCATGTATTAAGGTTGCAATGGATTTTGTCTCTCCTGAAAATGTTGGGGAGTGCTTTCGATTGACAGAGGAGTTTCGCACACTTCCAATAAACCACACGTCTACAGAGGACAAATTGGAGGTATGCCAAACTTTAACTTGTTTGATTCTGCTATTTATTAGCCCCTCCATGGTGGTTTTGAGTTGTAGAATCTCTCTATTTGTTTTAGTGAAGAAGATGACAATATATGCTATGCAAGATGTCCTCAGAAAATTGGAGGAACTTGAGAGGATTTGCAGAGCTCTTGATTCAATTATCATTTTTGAAATTGATAATTTGTTATTCAATTTAAAGGTCTAG 2589 0.4079 MRQGRGRKKQRGNRPIPVPLYAHPSFTINLVENTSSSVQSVKKKRSTEATKQEKETLLLLDKENIGEQNHPEDLGVSVSHQRLRGRKRKPLQYKDHVGLQNDSSTCHQCQRNDKERLVRCKSCKRKGFCLSCITNWYPHLEENDIAQACPVCCGNCNCKTCLISDELIQKLKGKTNTNEDYKYEHAMDLLQLLLPYVRQLDDEQMIENHTEAKIQGLSVSELNIVKADFAKDERVYCDNCKTSIFDYHRSCTKCSFDLCLICSRELRNGQLVGGADPIEWEFVFQGRGYLHAQKETKKVKQNASAFDAKPEIREWSRSGWHAESNGSIACPKGNDECNHGFLELRTILGKHFVSMIVHKANRLASAYNLQGVYKNPDNFCSCLRLDGNTDVRYNMRNAASREDSSDNYLYCPSAVDLQTKDLRHFQWHWEKGEPVIVSNVLECTSGFSWEPLVMWRAFRQIINTKHDQHLNMKAIDCLDWCEEEISIHQFFSGYAKGRMDWLGWPQILKLKDWPPSNLFEECLPRHYAEFISSLPFKEYADPLRGALNLAVKLPKNCLMPDMGPKTYIAYGFPQEFGRGDSVTKLHCDMSDTVNLLTHVAEVKLNPKQLTAIEELKQKHFEQDRRELLDDDQDGDTKVGNNSFSIRSSLDKLNYVQVMENEGALWDIFRRQDVPKLQEYLKKHFKEFRHIYGDPLKQVIHPIHDHTFYLTMEHKRKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVAMDFVSPENVGECFRLTEEFRTLPINHTSTEDKLEVCQTLTCLILLFISPSMVVLSCRISLFVLVKKMTIYAMQDVLRKLEELERICRALDSIIIFEIDNLLFNLKV 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01668 862 CDD cupin_RmlC-like 700 748 - -
Pste7g01668 862 Gene3D Cupin 409 785 - -
Pste7g01668 862 MobiDBLite consensus disorder prediction 1 20 - -
Pste7g01668 862 SMART cupin_9 523 776 IPR003347 -
Pste7g01668 862 ProSiteProfiles JmjC domain profile. 542 776 IPR003347 -
Pste7g01668 862 ProSiteProfiles Zinc finger RING-type profile. 106 152 IPR001841 -
Pste7g01668 862 Coils Coil 828 848 - -
Pste7g01668 862 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 102 166 IPR018866 -
Pste7g01668 862 Pfam JmjC domain, hydroxylase 663 759 IPR003347 -
Pste7g01668 862 SUPERFAMILY Clavaminate synthase-like 420 789 - -
Pste7g01668 862 FunFam Transcription factor jumonji domain-containing protein 406 785 - -
Pste7g01668 862 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 34 839 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01668 Pste-Chr7 15479966 15491434 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste7g01668 JmjC 9.4e-16 CL0029