Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01651 ATGAAGCGGGCAAGGAAATCTAACAGGGTTTCATGGGCCACTGGAGGGAATCTTTGTCAGGTAAAATTGTTCTTGTCTGAGGATTACCCCTCTAAAGTTGGCCAGAAATCACAAGATCATCTTCAGGCGAAGACATCATCATTGTTGCATTCTAGTAATAACGAACAGAATGATTTGCCCCCTGGGTTTGAAAGCAGTCATTTCTTAAACCAACCCAAGGTTGAATTCTCCCAAATTTCCCAGATAAAATGGGAATGCCCTCCGCTGGTTGTTGTCAGACCTCAATGGCGTGTTGCAGCAGGTGAAGAAAGTAGGGAGAAAGAGAATCAGAAATTGAGAGAAATGAGAGTGCTTGAAGCAGTTTATCCTCGTGTTTCTGCCATTCCTCCTAGCCCTTTTGTTTCTTTGGATGTAGAAGAGGAAGATTACAATGATGACATGACTCCTGTCATCCCTATCATTCCTATTGAAGAGGAGGAATCTATGGATATTTTACCCGAATTGGCAGTAGCAGGAAACCCTTCCCCCAATGTTCAGTCACAGAACTTTCAGCAATATGTATCTGCAAAAACTTCCACAAGTTCAGCCTCTAACACTTCTCATACTGCTTCATTGGATCCCTGTTTAAGGCAGTTAGCTGGGACATCTTCTGGTTTGGAAGCTGATTTAGTGGCAGCCTCTTCAGTTGTTGCAACCATTATGAAGAGTAATGAGCAAGGACACTTGATTGATATGGATTTACTGGTTAAAATATTTAATGATCCAAACATACTTGAGAAGTTGATTAATGAACATAGAAATGCAGAGACCACAGCAAGTGCTTCCACAAATACTGTTGATATACCCACTTCTGGTAGTAGGCCTGCTTTTCCATCTGCTCTGTTGTCTACATCTACGCCTGATGTGACAGCTTCTGGGACTACACCCACAAGTGCAGTGGGTTCATTGCCTTCTGGGCCAGCCAATCTGTCAGCTCCTGCAATTCCGTCAGTTTCACTATTGTCTTCTACACATGATAGGCAAGTGACTGCATCAGTTTCATTGTCCAGGCCTGTATCTGGTAAGCCAGTAACTCCCTCAGTCTCATTGCTTACACATACACCTGCACCTGATATGCACAGGTCTGTCGGCAAAAATTTTCATCATGTGTCAAGTGGCATGCCCCCTGCTTTGAACACCCAGACTCAGCAAGAGACAGCTCTGGCATCAGGGCCAAAGCGAGCTGCATCAGTTGCGCCCATACCTTATAGTGAATTAAGCTCTGGTCCATTGCCATCCACTACCGGAAACTTGCATGCTGTTGTGAACCAGGCGCAGTCCACTGCTAAGGATGCCAACTACTATAAAAACCTCATCAGGCAACACGGTGCAGATAAGCAAGAGATGCAGGACTCACACATAGGTATCCGTCATAGTAACTACCAAGATATGAAACCGGTACATAACATTAAACAAGGAGAAGTGAAACACAAAATCCCCAAACCATGCATATACTTTAAAAGCTCAAGGGGGTGCCGAAATGGTTCAAATTGCCCCTATCAGCATGATGTTTCAGCTCAATTGGGAGCTGGTAACGTCTTAGGGGCACAGAGTGCAAAAAGATTGAAATTGGGACTAGGGGAGAACTAAATCTTAAAAGAGGCATACTTTAACGGTAAAAACTATAAGGCTTCTTTTGTTTAACGGTACAGAATTTGCACATACAGACAGAGAGGGGGAAGGGTAAAAAGTGGAACAATGATTTAATTGGTTTTACTAAGTTTTCTGGGAGTGTTTAGGTGGCCATAATTTAATTTTGGGCTTGCAGTAATTTTCATACAATTGGGTGGTGGGTTTTTATGGTTTTGACAGGGTCAGTTGGTTTGAGAATTTGACATTAGTGTTTTGGTCAAAATAGTATTTTTTATTTGCAGGTTGTTGGGGGAGATTTGTGCGGTCTCAGTCAAGTGGGCCATGCGTCATGGTTCTCTGTTCTCAGCCATTAACCATTAATTTTCAGTGCATAATAAGAAAC 2014 0.429 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSLLHSSNNEQNDLPPGFESSHFLNQPKVEFSQISQIKWECPPLVVVRPQWRVAAGEESREKENQKLREMRVLEAVYPRVSAIPPSPFVSLDVEEEDYNDDMTPVIPIIPIEEEESMDILPELAVAGNPSPNVQSQNFQQYVSAKTSTSSASNTSHTASLDPCLRQLAGTSSGLEADLVAASSVVATIMKSNEQGHLIDMDLLVKIFNDPNILEKLINEHRNAETTASASTNTVDIPTSGSRPAFPSALLSTSTPDVTASGTTPTSAVGSLPSGPANLSAPAIPSVSLLSSTHDRQVTASVSLSRPVSGKPVTPSVSLLTHTPAPDMHRSVGKNFHHVSSGMPPALNTQTQQETALASGPKRAASVAPIPYSELSSGPLPSTTGNLHAVVNQAQSTAKDANYYKNLIRQHGADKQEMQDSHIGIRHSNYQDMKPVHNIKQGEVKHKIPKPCIYFKSSRGCRNGSNCPYQHDVSAQLGAGNVLGAQSAKRLKLGLGEN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01651 542 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 538 - -
Pste7g01651 542 ProSiteProfiles Zinc finger C3H1-type profile. 491 518 IPR000571 GO:0046872
Pste7g01651 542 MobiDBLite consensus disorder prediction 345 365 - -
Pste7g01651 542 MobiDBLite consensus disorder prediction 386 403 - -
Pste7g01651 542 MobiDBLite consensus disorder prediction 268 318 - -
Pste7g01651 542 MobiDBLite consensus disorder prediction 345 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01651 Pste-Chr7 15360663 15364919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01651 81 152 Homeobox Transcription Factor Family AT4G02560 41.667 2.85e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste7g01651 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01651 7 15360663 15364919 Pste7g01651 7 15360663 15364919 ECH
Pste7g01651 7 15360663 15364919 Pste1g03000 1 13283055 13294098 ECH
Pste1g03000 1 13283055 13294098 Pste7g01651 7 15360663 15364919 PCT