Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01635 CCGAACGTGAAAGCGGGAGTCAATATTCGAAAACTAGATCAAAACAAAGAAAAAGAAAGTGTGGCCGCTCAATTTTTTCTACAACGGCCATGGAGGATGTTCATAATTCTCAGAGCAAGAAGCGGAAACGAAGGTTTTCGAAAAAGCTTCAAGTCGATGAAATGGTCGAGGTGAGGAGTATGGAGTTGGGGTTCCAAGGATCATGGCACCCTGGGAAAATTATCCAGTGTGAGAAGCTGAAGAGACATGTTAGATATAACAATCTTTTGGATGATGATGGAGTCAATTATCTTGTGGAGGTAGTCAATGTTTCAGAAACTTTAGAAGACGGAATTGAATGTGACGACTTGTATGTGCGGGGGCTCATCAGGCCAGTGCCTCCTTGGATTGATTTTGAGAGAGGGGACCTTAACTTTGGTCTGTGTGTTGATGTCAACTATCAGGAAGCATGGTGGGAAGGTGTTATATTTGACAACTGTGATGGAATGGAGAATAGGAGTGTGTTTTTCCCTGATTTTGGTGATGAGATTCAAGTTGGAATTCATCAGTTGCGGATTACCCAAGACTGGGATGAAGTTACCGACGAGTGGATGCGCCGAGGGAACTGGGTTTTTCTTGATTTGATTGAGGAGCAGGAGAGGAAATTGTTGGTTGCTGTTTCAGCTAAGCAAATCTGGTACGATTTACAAATAAAAAGGGAATTTAAGATGATTAAAGAGTGGACATTTAATGTGAAGTACTTGTGGAGAGATATGGTAGTGGAGATAGTTAATGACTACTTATCTCTTACAGTAAAAGAAATTCTCTCAATCTTAAATCCATCAGATAATATTCAGAATCCCGATATCTTTCCTCCAACTGTGTCATCTTCTGTGGTTAATGAAGAAGTTGAAGATGTACCTGAGTTTTGTCCTGAAGCTATGGCTGGTGTGGACTTAAGCATGTCCTTGCCTGATAAGGAAATTGTTGTGCAGAAAGTTCCTCTTGTTAAAGAAATTAGTCCCAATGGTGATTGTGAAGTAGTTTCTGGTGCTAGCTGTTTGGAAGAAAACAGAGAAGATAGATTCTCAACTGATAGCAATTGGAAACCTCTAAAGTTGTCTGAAGGTGAATTATGCCCTGATGCTGTTGAGGAATATCTACTTGCTTCCGATAGAGAAACCAGGGCATTTTGGAAGGACAAATTACAAAAACATCTTATATGTCTTGGATGGAAAATTGAGTGGACAGATAAATATAAAAGTAAACGTTACAGGTATAATGTGCCTGATAAACAGGGCCAAAAATTTTATCTCTCTCTCCTTGAAGTGTGTAGAGTTATGAAAAAGGATAAAATGCATCCTACAGTTGACTGTCATCCTTCAGATCAGCCTCTTAATCCATCAGATAATATTCAGAATCCATATATCTTTCCTCCAACTGTGCCATCTTCTGTGGTTAATGAAGAAGTTGAAGATGTACCTGAGTTTTGTCCTGAAGCTGTTGAGCAGTACTATAACTCCTATATAACTAATAAGAGTCGTGCTTTTAAAAAAAAATGGATACTGAAAGCAAAGAGGCATCTGTTAGCAGAAGGTTGGATTTTTGACTATCCACCTCCAACCAATAAGAAAAGGGGAATAATATACATATCTCCAGAAGATCGGAGATTCCCAACACTCCATGCAGCATGCAAATTTTGTATGGAAAAAGGTATTTCTAAATTGGCTACGTCTGACATGAGACCTTTAAATGTCTTGGGAAAGAACGAAGTAAATGTCGATCAGGTTTCAATTGGTGAACTTCCTAAGGGCTCTGAGTTGCAAGCTATGGATGGTATTGTTGCTAGTAGATCAACTGCACATAAAAAACGGAAAAGGGTGAGGGATTCAAAGGTCAACACATCTACGTGCCAAAGAAATGGAAAGCCTCTACGGGTGCTAAGATTAAATAAGAGGGTGCAAAAGGTGTCTGCTCCTTCTCTTTTACATCCTAAACCACTAAATGTTCTGTCTTGCTTGATAGACAAACGCATTATCTTATCGAGGTCTAAGGTTTACTATAAGTCGAAAGGCAGATATGTCCAAACTTTGGCTGAGGGAAAAATAACTCGTGATGGAATCAAGTGTAACTGTTGCCTGGCTATATATAGTTTTGTTGGCTTTGAAAATCATGCTAGTGGCAGTAGTACCTGCAGACCCTCTGCCAGTATCTTTTTGGAAGATGGTAAATCACTCTTGGATTGCCAGATAGAAATGATGCAACGCCATATGACCAGGGAAACTAGTGGAAAATCATTCAGTGATTTGTCTCTGAGTGATTACATTTGTTCTGTTTGCCACTATGGTGGCAAACTTATTTTATGTGATAAATGTCCGTCTTCATTTCATAAGACCTGTCTTGGTTTGGAGGATATCCCTGCTGGTGACTGGTTTTGTCCATCATGCCGTTGCGGGATTTGTGGCCAATGGAAAATTGATGGAAATGAGATTGGACATTTCCTTACTTGCGTCCAGTGTGAACATAAGTGCCTGGAAAATGGAGCTTCAGATAAATCAATATATCTTGGAAACTGGTTCTGTGGAAAAGAGTGTGAAAAGATATATGATGGCCTTCATAAATTATTAGGGGAGCCCGTTTCAGTGGGTGTGGACAATCTAACTTGGACATTGGTGAAGTTTATCAACCCTGACAGTTGTGATCCTGGTAGTATTAGAAATGACTTATTGGCAGAGAGTTGTATCAAACTCAATCTTGCACTTTCGGTGATGCATGAATGCTTCAAGCCTCTAAAAGAATATTTCACTGGCAGAGATCTCATGGAAGACGTTATATTCAGCAGATGGTCCGAGCTTAACCGATTAAATTTCCAGGGTTTCTATATTGTAATACTTGAGAGAGATGAAGAACTGATTAGTGCGGCAACTGTTAGGGTCCATGGAAAGAAGGTAGCAGAAGTACCTCTTGTTGGTACCAGATTACAATATCGTCGACATGGAATGTGTCGCATTTTAATAAGGGAGCTTGAAAAGGAGCTCATTCAATTAGGTGTGGAGAGACTTGTTTTGCCAGCAGTTCCTAGCGTGCTAGAAACATGGACTGGCTCTTTTGGCTTTGCAAAGATGACTGATTTTGAGAGGTCTCAATTTCTGGATTATACTTTTCTGGATTTTCAGGATACCATCATGTGCCAAAAGCTAGTCACAACCAAAAGTACTTGTGTAGGTAACGAGGATCATGTTATTGGTGCTCTTGAGTCACTGACATTGCGACCGAGTCCTGGAGATCAACAGCGCCAGAATGGAACAACCAGCTCAGAGTGTTCTAATGATAAACTAGTTGACAGGAATAATGATGACATGTGTAAGCTATTCTACTCACCGAAGAAAGTGAGTAAGACATGTGAAGGATTAGCATTTCATGGTGAGCTTGCACTACAGGGATTCGAATTAGCAGAGTACAAGAAAGATGAT 3452 0.4006 MEDVHNSQSKKRKRRFSKKLQVDEMVEVRSMELGFQGSWHPGKIIQCEKLKRHVRYNNLLDDDGVNYLVEVVNVSETLEDGIECDDLYVRGLIRPVPPWIDFERGDLNFGLCVDVNYQEAWWEGVIFDNCDGMENRSVFFPDFGDEIQVGIHQLRITQDWDEVTDEWMRRGNWVFLDLIEEQERKLLVAVSAKQIWYDLQIKREFKMIKEWTFNVKYLWRDMVVEIVNDYLSLTVKEILSILNPSDNIQNPDIFPPTVSSSVVNEEVEDVPEFCPEAMAGVDLSMSLPDKEIVVQKVPLVKEISPNGDCEVVSGASCLEENREDRFSTDSNWKPLKLSEGELCPDAVEEYLLASDRETRAFWKDKLQKHLICLGWKIEWTDKYKSKRYRYNVPDKQGQKFYLSLLEVCRVMKKDKMHPTVDCHPSDQPLNPSDNIQNPYIFPPTVPSSVVNEEVEDVPEFCPEAVEQYYNSYITNKSRAFKKKWILKAKRHLLAEGWIFDYPPPTNKKRGIIYISPEDRRFPTLHAACKFCMEKGISKLATSDMRPLNVLGKNEVNVDQVSIGELPKGSELQAMDGIVASRSTAHKKRKRVRDSKVNTSTCQRNGKPLRVLRLNKRVQKVSAPSLLHPKPLNVLSCLIDKRIILSRSKVYYKSKGRYVQTLAEGKITRDGIKCNCCLAIYSFVGFENHASGSSTCRPSASIFLEDGKSLLDCQIEMMQRHMTRETSGKSFSDLSLSDYICSVCHYGGKLILCDKCPSSFHKTCLGLEDIPAGDWFCPSCRCGICGQWKIDGNEIGHFLTCVQCEHKCLENGASDKSIYLGNWFCGKECEKIYDGLHKLLGEPVSVGVDNLTWTLVKFINPDSCDPGSIRNDLLAESCIKLNLALSVMHECFKPLKEYFTGRDLMEDVIFSRWSELNRLNFQGFYIVILERDEELISAATVRVHGKKVAEVPLVGTRLQYRRHGMCRILIRELEKELIQLGVERLVLPAVPSVLETWTGSFGFAKMTDFERSQFLDYTFLDFQDTIMCQKLVTTKSTCVGNEDHVIGALESLTLRPSPGDQQRQNGTTSSECSNDKLVDRNNDDMCKLFYSPKKVSKTCEGLAFHGELALQGFELAEYKKDD 1121
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01635 1121 ProSiteProfiles Zinc finger PHD-type profile. 737 782 IPR019787 -
Pste7g01635 1121 SMART agenet_At_2 18 101 IPR014002 -
Pste7g01635 1121 SMART agenet_At_2 105 162 IPR014002 -
Pste7g01635 1121 Gene3D - 886 1030 - -
Pste7g01635 1121 Pfam Agenet domain 24 98 IPR008395 -
Pste7g01635 1121 CDD NAT_SF 925 986 - -
Pste7g01635 1121 PANTHER PHD FINGER PROTEIN 12 456 1073 IPR042163 GO:0003714|GO:0045892
Pste7g01635 1121 MobiDBLite consensus disorder prediction 1054 1074 - -
Pste7g01635 1121 CDD Tudor_Agenet_AtDUF_rpt1_3 20 98 - -
Pste7g01635 1121 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 868 1031 IPR000182 GO:0016747
Pste7g01635 1121 Pfam Tify domain binding domain 664 716 IPR032308 -
Pste7g01635 1121 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 733 827 IPR013083 -
Pste7g01635 1121 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 910 1013 IPR016181 -
Pste7g01635 1121 SMART PHD_3 739 780 IPR001965 -
Pste7g01635 1121 Pfam PHD-finger 739 781 IPR019787 -
Pste7g01635 1121 SUPERFAMILY FYVE/PHD zinc finger 723 780 IPR011011 -
Pste7g01635 1121 MobiDBLite consensus disorder prediction 1054 1075 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste7g01635 Pste-Chr7 15188474 15199548 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01635 29 974 PHD Transcription Factor Family AT5G58610 35.787 8.65e-177 542
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste7g01635 Agenet 4.2e-16 CL0049