Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01627 GTGAGGAGTATGGAGTTGGGGTTCCAAGGATCATGGAACCCTGGGAAAATTATCCAGTGTGAGAAGCTGAAGAGGCATGTTAGATATAACAATCTTTTGGATGATGATGGGGTGAATTATCTTGTGGAGGTAGTCAATGTTTCAGAAGCTTTAGAAGACGGAATTGAATGTGACGACTTGTATGTGCGGGGGCTCATTAGGCCAGTGCCTCCTTTGGTAGAGTTTGAGAGAGGGGACCTTAAATTTGGTCTGTGTGTTGATGTGAACTATCAGGAAGCATGGTGGGAAGGTGTTATATTTGACCACTGTAATGGAATGGAGAAGAGGAGTGTGTTTTTCCCTGATTTGGGTGATGAAATGCAAGTTGGAATTCATCAGTTGCGGATTACTCAGGACTGGGATGAAGTTACCGACAAGTGGATGCGCCGAGGGAACTGGGTTTTTCTTGATTTGACTGAGGAGCAGGAGAGGAACTTGTTTGTTGCTGTTTCAGCTAAGCAAATCTGGTATGATGTACGTATAAAAAGGGAATTTAAGATGATTAAAGATTGGACATTTAATGTGAAGTACTTGTGGAGAGATATGGTAATGGAGATAGTTAATGACTACTTATCTCTTACAGTAAAAGAAGTTCTCTCAGTCTTAAATCTTCCTGGGAGTTTACTAAATGAAGCACCAGAGCTGGAAACTGTTGAAGCTATGGCTGGTGTGGAGTTAAGCATGTCCTTGCCTGATAAGGAAATTGTTTTGCAGAAAGTTCCTCTTGTTAAAGAAATTAGCCCCAATGGTGATTGTGAAGTAGTTTGTGGTGCTAGCTGTTTGGAAGAAAACAGAGAATATAGATTCTCAACTGATTTATTTTCCAACAATTGGAAACCTCTTAAATTGTCTGAAGGTGAATTATGCCCTGATGCTGTTAAGGAATATCTACTTGCTTCCAATCGAGAAAGTAGGGCATTTTGGAAGGATAAATTACAAAAACATCTTGTATGTCTTGGGTGGAAAATTGAGTGGACAGATAAATATAAAAGTAAACGTTACAGGTATAATGTGCCTGATAAACAGGGCCAAAAGTTTTATCTCTCACTCCTTGAAGTGTGTAGAGTTATGAAAAAGGATGTAATGCATCCTACAGTTGACTGTCATCTTTCAGATCTGCCTTTTAATCCATCAGATAATATTCAGAATCCAGATATCTTTCCTCCAATTATGCCATCTTCTGTGGTTAATGAACAGGTTGAAGATGTACCTGAGTTTTGTGCTGAAGCTGTTGAGCAGTATTATAACTCCTATATAACCAATAAGAATCGGGCTTATAAAAAAAAATGGATACAGAAAGCAAAGAGGCATCTGTTAGCAGAAGGTTGGATTTTCGACTATCCACCTCCAACTAATAAGAGAAGGGGAATAATATACATATCTCCAGAAGATCGGAGATTCCAAACACTTCATGCAGCATGCAAATTTTGTATGGAAAAAGGCATTTCTCAATCGGCTATGTCTGACATGAGACCTTTAAATGTCTTGCGCAAGAACGAAGAAAATGGCGATCAGGTTTCAATTGGTGAATTAGTATGTAAACCATCACAATTGCTTCCTAAAGGCTCTGAGTTGCAGGCTATGGATGGTATTGTTGCTAGTAGATCAACAGCAGATCGAAAGCAGAAAAAGGTGAAGGATTCAAAGGTCAACACATCTAAGTGCCAGAGAAAGGGAAAGCCGCTACGGGTGCTAAGATTAAATAAGAGGGTGCAAAAGGTGTCTGCTCCTTCTCTTTTACATCATAAACCATTAAATGTTCTGTCTTACTTGATAGACAAAAGCATTATCTTATCGAGGTCCAAGGTTTATTATAAGTCAAAAGGCAGGCACCGATATGTCCGTACTTTGGCTGAGGGAAAAATAACTCGTGATGGAATCAAGTGTAACTGTTGCCTGGCAATATATAGTTTTGTTGGCTTTGAAAATCATGCTAGTGGCAGTAGTACCTGCAGACCCTCTGCTAGTATCTTTTTGGAAGATGGTAAATCACTCTTGGATTGCCAGATAGAAATGATGCAACGCTATATGACTAGGGAAACTAGTGGAAAACCATTCAGTGATTTGTCTAGTGACTATATTTGTTCTGTTTGTCACTATGGTGGTGAACTTATTTTGTGTGATAAATGTCCGTCTTCATTTCATAAGACCTGTCTTGGTTTGGAGGATATCCCTATTGGTGACTGGTTTTGTCCATCATGTCGTTGCGGGATTTGTGGCCAAAGGAAAATTGATGGAAATGAGATTGGACATTTCCTTACTTGTGTTCAGTGTGAACATAAATATCATGTTAGGTGTCTGGAAAATGGAGCTTCAGATAAATCAATATATCTTGGAAACTGGTTCTGTGGAAAAGAATGTGAAAAGATATATGATGGGCTTCATAAATTATTAGGAGAGCCGGTTTCAGTGGGCATGGACAATCTAACTTGGACATTGGTGAAGTTTATCAACCCTGACAGTTGTGATCCTGGTAGTATTAGAAATGACTTATTGGCAGAAAGTTACGTCAAACTCAATCTTGCACTTTCACTGATGCATGAATGCTTCGAGCCTCTAAAGGAATCTTTCACTGGCAGAGATCTCATGGAAGATGTTATATTCAGCAGATGGTCAGAGCTTAACCGATTAAATTTCCAGGGTTTCTATATTGTGCTACTTGAGAGAGATGAAGAACTGATTAGTATGGCAACTGTTAGGGTCCTTGGGAAGAAGGTAGCAGAAGTACCTCTTGTTGGTACCAGGTTACAGTATCGTCGACATGGAATGTGTCGCATTTTAATAAAGGAGCTTGAAAAGGAGCTCATTCAATTAGGTGTGGAGAGACTTGTTTTGCCAGCTGTTCCTAGCGTGCTAGAAACATGGACAGGCTCTTTTGGCTTTGCAAAGATGACTGATTTTGAGAGGTCTCAATTCCTGGATTATACTTTTCTAGATTTTCAGGATACCATCATGTGCCAAAAGCTAGTCACAACCAAAAGTAACGGGGATCATGTTGTTGGTGCTCTTGAGTCACTAACATTGGTGGAGCAACCGAGTCCTGGAGATCAACAGCGCCAAAATGGAACAACCAGCTCAGAGTGCTCTAATGCTAAACTAGTTGACAGGAATAATGGTGACATGTGTAAGTTATTCTACTCACCAAAGAAAGTAAGACATGTGAAGGATTAGCATTCAATAGTGAGGTTGCACTACAGG 3237 0.3979 VRSMELGFQGSWNPGKIIQCEKLKRHVRYNNLLDDDGVNYLVEVVNVSEALEDGIECDDLYVRGLIRPVPPLVEFERGDLKFGLCVDVNYQEAWWEGVIFDHCNGMEKRSVFFPDLGDEMQVGIHQLRITQDWDEVTDKWMRRGNWVFLDLTEEQERNLFVAVSAKQIWYDVRIKREFKMIKDWTFNVKYLWRDMVMEIVNDYLSLTVKEVLSVLNLPGSLLNEAPELETVEAMAGVELSMSLPDKEIVLQKVPLVKEISPNGDCEVVCGASCLEENREYRFSTDLFSNNWKPLKLSEGELCPDAVKEYLLASNRESRAFWKDKLQKHLVCLGWKIEWTDKYKSKRYRYNVPDKQGQKFYLSLLEVCRVMKKDVMHPTVDCHLSDLPFNPSDNIQNPDIFPPIMPSSVVNEQVEDVPEFCAEAVEQYYNSYITNKNRAYKKKWIQKAKRHLLAEGWIFDYPPPTNKRRGIIYISPEDRRFQTLHAACKFCMEKGISQSAMSDMRPLNVLRKNEENGDQVSIGELVCKPSQLLPKGSELQAMDGIVASRSTADRKQKKVKDSKVNTSKCQRKGKPLRVLRLNKRVQKVSAPSLLHHKPLNVLSYLIDKSIILSRSKVYYKSKGRHRYVRTLAEGKITRDGIKCNCCLAIYSFVGFENHASGSSTCRPSASIFLEDGKSLLDCQIEMMQRYMTRETSGKPFSDLSSDYICSVCHYGGELILCDKCPSSFHKTCLGLEDIPIGDWFCPSCRCGICGQRKIDGNEIGHFLTCVQCEHKYHVRCLENGASDKSIYLGNWFCGKECEKIYDGLHKLLGEPVSVGMDNLTWTLVKFINPDSCDPGSIRNDLLAESYVKLNLALSLMHECFEPLKESFTGRDLMEDVIFSRWSELNRLNFQGFYIVLLERDEELISMATVRVLGKKVAEVPLVGTRLQYRRHGMCRILIKELEKELIQLGVERLVLPAVPSVLETWTGSFGFAKMTDFERSQFLDYTFLDFQDTIMCQKLVTTKSNGDHVVGALESLTLVEQPSPGDQQRQNGTTSSECSNAKLVDRNNGDMCKLFYSPKKVRHVKD 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01627 1069 Pfam Agenet domain 1 71 IPR008395 -
Pste7g01627 1069 SUPERFAMILY FYVE/PHD zinc finger 694 748 IPR011011 -
Pste7g01627 1069 CDD NAT_SF 897 958 - -
Pste7g01627 1069 MobiDBLite consensus disorder prediction 1024 1044 - -
Pste7g01627 1069 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 699 749 IPR013083 -
Pste7g01627 1069 ProSiteProfiles Zinc finger PHD-type profile. 705 750 IPR019787 -
Pste7g01627 1069 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 842 1003 IPR000182 GO:0016747
Pste7g01627 1069 Pfam PHD-finger 707 749 IPR019787 -
Pste7g01627 1069 PANTHER PHD FINGER PROTEIN 12 415 1041 IPR042163 GO:0003714|GO:0045892
Pste7g01627 1069 SMART PHD_3 707 748 IPR001965 -
Pste7g01627 1069 SMART PHD_3 749 800 IPR001965 -
Pste7g01627 1069 SMART agenet_At_2 78 135 IPR014002 -
Pste7g01627 1069 Gene3D - 856 1002 - -
Pste7g01627 1069 Pfam Tify domain binding domain 633 685 IPR032308 -
Pste7g01627 1069 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 750 803 IPR013083 -
Pste7g01627 1069 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 858 985 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01627 Pste-Chr7 15093739 15103055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01627 2 946 PHD Transcription Factor Family AT5G58610 36.575 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste7g01627 Agenet 6.2e-12 CL0049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01627 7 15093739 15103055 Pste7g01627 7 15093739 15103055 ECH
Pste7g01627 7 15093739 15103055 Pste8g01666 8 10565214 10572485 PCT