Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01622 TGAACAAGTACAGAGCAATGAAAAGTCAATGGCAAAAGTGTTGTTGACGGGTGTTTCTTCTTGGTTGGGTGTTTGCAACACAGGCATGACACAATGGCCAAGGCCAGTCTGGACAACATCCGCGTCACACTCTCCGACATCTCCACTCCGCCGCCGGATGAGCGCCCCTTCGACACCCCCCGCCGCTTCGCCGCCTTGGCCCACCGTCTCTCCGAAGTCGTCCTCCTCCCACTCCCCGACGCTCCTCCGGTCCACACCGCCCTCAAGGGCCTCGCCGCCGAGCTCCCCAAGGCCGCCGAAACACTCTCCCTCTACAACAACGGCAGCAAGATACTTGTTCTCCTAAACTGCAAACTCCTCTGTTCGGCCCTCCAAGAACGCGCCGTCGCCATCGCCGCCTGGCTCGCACTCCTCGCCTCCGCCCTCCCCAACGGCCTCCGCAAGAACGTCTCCGACCTCACCAGGGATATCAAGCTCGCACACTTCAAAGTCTCAGAAAATGAAGAGAGGGTTTGGTGCACGCTGGAAAAGGAAGCGGAAGGGAGAGAGAGCAGCAAAGCGGTGCAGAGTGGTATTGTCATGGATTTGGCTCGTGCTTTGGGTTTTGACCCTAGTGATCGTGCTGAGTTTTGTAACCAAGTGAGGCTCTTCAAAGGTGATCCTTTTAGATGTCATTCTGTGCCCGAGAGAAGGGTTTTGATGTGCTTGGAGAGAATTCTTAGTAACTGGTCTGTGGAGCCTGTCTCTGTGAGCCCCAATTGGGACTTTGAAATTTCTGAAGATGCTACAGCTCCTGTTTTTCCATTCAAGAGTTTCCTTTGCCCCTTGACCAAGGAAGTTATGAGGGACCCAGTGGTTGTTCTGGAGTCCTCTCAGGCCTATGAGAGGACTGCTATAGAGTACTGGTTTGAGCGGTGCATCCAGGATGGTCGTGACCCAACCTGTCCGGTAACTGGAGCGGTTCTTAAGTCCTTGGAGCTGAAGCCCAACATTGGGTTGGCCGGGGCAATTGAAGAGTGGGTTGGCAGGGTTATTGAGTATCAAATCAAATCTGCAGTGCACTATCTAAGTGAGGAACCCTTGTCGGTGGATCATGTTGAGCGTGCTCTGGATCATGTTTATAAGGTTTCTGAAGAGCACCCTACTAGAAGATACATAATCAGGAATGCTGGTGTTGTGCTGTTGATAGTGACTGTGCTCAGTAATAACTCCAAAACTATTGGATCGCGTTTGAGAACCAAAGCTCTAATGACTTTACTTTGCATGGCCAAGGATGAAGAAAGCCGGAAAATAATGCTTGAACGTGGTATCACTAGACTGGCCGTACATAGTCTTATTGGGAACTCTGAGAAAGAGAGAGAGTATGCTATCAAGTTATTACTAGAGTTCTGCAGTGATGAACATTGTTGTGTAAGAATAGCATCAGAAAAAGGTGCATTGGTTCTTCTTTCAAGTATAGCAGGAAATCTGGAGTTTCCATCTTTGTCCAATTTAGCTGAGGAAGTCTTAAGGCAGATGGAAATGGTAGAGGATAATGTTCAATGTTTGGCAGCAGCTGGAAGATTTGGACCATTGATTTCACGGTTACATGATGGTTCTGTTGGTGTAAAGATAGAGATGGCTTCTCTGGTGGGAAGGATGACCTTGACAAATAGCTGTAAAGAACAAATTGCAAGGCAAGGTGCCAGAGTATTTGTTGAACTTCTTTCTAATCAAGAAGGAAAGGGGGCAAGTCTTCAAGCATTGTACAACTTGTCAGGATTGGACGCCAATGTAACCATCCTTATTGAATCTTCACTCCTTCCATCTGTTATAGAAATTTTATTTGATGAGCAGGATGAATCATATGAGCTGAAGTCATTAGCTGCTTCAACAATTGCGAATATTGTATCTAAGCCAGGGCATTGGGAATTAGCATCTGCTGACAAGAAAGGAAACCCAATGCAATCAGAAATTATTGTTTCAAGACACTTGGGGCTTTTAAATAGTTTGCCCTCTCAGTGTCAAGTGATAGTTCTCCGCATTCTTTGTGGTATCATTTCATCTCCTCAGGCATCAGAGTTAGTAGCAAGTCATATTACATCGAAGAGTGGCTTTGGGACGGTCATACCATTTCTTGAACATCCAGAAGTTGAACACAGAGTCTTTGCTTTTAGGCTTACAAGACTATTATCTGAATGGTGTAGTCAATCTATTGGAAATGAGTTGAAAGTTTCAAACAAACTTACAGTACTTAAAGAAAAACTGTTAAATAACCAATCTACAAATGATGAACGATCAGATGCAGCACAAATACTTGCCAATCTTTCCCTCTCAGAAGGTGAAGTACAGACACTATTAGGAGGTGATTTTGTGGAATGGACTGCTTCTACACTCAAGAACCGGTGGCGTGTTTCCAATGCAAGGTCTTCAAATACTGCTTCAGGCATGCGGGAAGGTCTTATAGGTCTCTTGCTTCACTTCACAAGGAACCTTGATCAACAAACCCTTAATCTAGTTAAAGAAAATCGCCTTATGGCCATTTTCTGTGAGCATTTGGATTATACTTCAAAATCAAAGGTAAAGCGACTTGCTGCCATTGGATTGAAAAACTTATCAGAATTTGGAAGATCAGTTACTTCTGGGGACTCTAAACCACCATCTTCCAGTGGATTATGCTCTGCCCTCCTGCTCGTTTGTGGGAAAGCCTCTAGTCAACCTTCTGCTTGCCCCATTCACAACAGCCCATGCAATGAAGATAGTCAGCTGTGCCTGCTCAAGAGCAATTGTATCAAACCCCTGGTTGATACCCTCCATGACAATGAAACTGATGTTCAGCTTGCTGCAGTGGATGCACTATCTACTCTACTACTAGATTACACATCTCGCAGTTTCAAAAGAGTTGTTGATGAGCTTGAGCATCTGGGTGCGGTTGATGCTCTTATCACACTTTTTACAGAGGTTAGATCTGAGAAGCTTCAGGAGAAGACAATTTGGGTGATAGAAAAGATATTGAGAGTGGAAAACATCAGCAACCGGTATGCACTCAATCAATCTCTTGTAAGAGCTTTGATTGAAGCCTTTAAGCATGGCAATACCAACACAAGGAAACATGCTCAAGATGCTCTAACCTTCCTAAAGCAGTTATCAGGAGTTAGTGGGAAAACATCAAGTCAAACTCGAGCTCGAAGATAGCAAAAAGCTGTTCAAATATTGTATAACCAAACAACAATCTTTCCCTCTATTGTTTGTATAGAAGTCATAAAGAGTTAAATGGCAAAATTGATTGTACACATCTACCATGTAATGTCATTATTGTAAACATTCATTTCGCAAGAGTTACCACAGGGAGAAAGAAAT 3339 0.4474 MAKASLDNIRVTLSDISTPPPDERPFDTPRRFAALAHRLSEVVLLPLPDAPPVHTALKGLAAELPKAAETLSLYNNGSKILVLLNCKLLCSALQERAVAIAAWLALLASALPNGLRKNVSDLTRDIKLAHFKVSENEERVWCTLEKEAEGRESSKAVQSGIVMDLARALGFDPSDRAEFCNQVRLFKGDPFRCHSVPERRVLMCLERILSNWSVEPVSVSPNWDFEISEDATAPVFPFKSFLCPLTKEVMRDPVVVLESSQAYERTAIEYWFERCIQDGRDPTCPVTGAVLKSLELKPNIGLAGAIEEWVGRVIEYQIKSAVHYLSEEPLSVDHVERALDHVYKVSEEHPTRRYIIRNAGVVLLIVTVLSNNSKTIGSRLRTKALMTLLCMAKDEESRKIMLERGITRLAVHSLIGNSEKEREYAIKLLLEFCSDEHCCVRIASEKGALVLLSSIAGNLEFPSLSNLAEEVLRQMEMVEDNVQCLAAAGRFGPLISRLHDGSVGVKIEMASLVGRMTLTNSCKEQIARQGARVFVELLSNQEGKGASLQALYNLSGLDANVTILIESSLLPSVIEILFDEQDESYELKSLAASTIANIVSKPGHWELASADKKGNPMQSEIIVSRHLGLLNSLPSQCQVIVLRILCGIISSPQASELVASHITSKSGFGTVIPFLEHPEVEHRVFAFRLTRLLSEWCSQSIGNELKVSNKLTVLKEKLLNNQSTNDERSDAAQILANLSLSEGEVQTLLGGDFVEWTASTLKNRWRVSNARSSNTASGMREGLIGLLLHFTRNLDQQTLNLVKENRLMAIFCEHLDYTSKSKVKRLAAIGLKNLSEFGRSVTSGDSKPPSSSGLCSALLLVCGKASSQPSACPIHNSPCNEDSQLCLLKSNCIKPLVDTLHDNETDVQLAAVDALSTLLLDYTSRSFKRVVDELEHLGAVDALITLFTEVRSEKLQEKTIWVIEKILRVENISNRYALNQSLVRALIEAFKHGNTNTRKHAQDALTFLKQLSGVSGKTSSQTRARR 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01622 1026 SUPERFAMILY ARM repeat 483 1006 IPR016024 -
Pste7g01622 1026 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 238 311 IPR013083 -
Pste7g01622 1026 ProSiteProfiles U-box domain profile. 236 316 IPR003613 GO:0004842|GO:0016567
Pste7g01622 1026 CDD RING-Ubox_PUB 241 296 IPR045210 -
Pste7g01622 1026 Gene3D - 874 1022 IPR011989 -
Pste7g01622 1026 Gene3D - 312 838 IPR011989 -
Pste7g01622 1026 SMART arm_5 927 968 IPR000225 GO:0005515
Pste7g01622 1026 SMART arm_5 880 920 IPR000225 GO:0005515
Pste7g01622 1026 SMART arm_5 349 393 IPR000225 GO:0005515
Pste7g01622 1026 SMART arm_5 794 836 IPR000225 GO:0005515
Pste7g01622 1026 SMART arm_5 394 434 IPR000225 GO:0005515
Pste7g01622 1026 SMART arm_5 519 556 IPR000225 GO:0005515
Pste7g01622 1026 SMART arm_5 557 600 IPR000225 GO:0005515
Pste7g01622 1026 SUPERFAMILY ARM repeat 324 604 IPR016024 -
Pste7g01622 1026 Pfam U-box domain 241 310 IPR003613 GO:0004842|GO:0016567
Pste7g01622 1026 SMART Ubox_2 240 309 IPR003613 GO:0004842|GO:0016567
Pste7g01622 1026 SUPERFAMILY RING/U-box 237 310 - -
Pste7g01622 1026 Coils Coil 468 488 - -
Pste7g01622 1026 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 48 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01622 Pste-Chr7 15035212 15041492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01622 238 1015 U-box Gene Family AT1G20780 27.869 2.43e-79 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01622 7 15035212 15041492 Pste7g01622 7 15035212 15041492 ECH