Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01614 ATGTGCAGTGGTTCCAAGAGAAAACCTTCTCAAACTGGTTTAATAATGGGGGATGTGCATGGGAGACAAGATGGTGTGCACCATAAAATTTCTGCTTTGCTCGAGTTTTCAGCCGCAGATGATGTAATGGCTTTCAAAGATGCTGTCGAAAAAGAGGGTCATGATGTTGATGAGGTGGGGTTGTGGTATGGAAGGAGGGTTGACTCAAAAGAATTGTGTTTTGAAGAGAGGACCCCTCTTATGATTGCTGCAATGTTTGGAAGCAAAAGTGTGTTATCTTACATTCTTGGGATGGGTCGTATTGATGTTAACAGAGCTTGTGGGTCAGATGGGGCTACTGCCCTTCATTGTGCTGTTGCTGGGGGTTCTGCTGCCTCCCTTGAAGTAATCAAACTTTTGCTTGATGCATCTGCAGATGTTAGTGCTGTTGATGCCAACGGAAACAGGTCGTGTGACTTGGTTGCCTCGGTGTCGGACGGTGTGTTCAGTTCACGAAAGAGAATACTGCAATCCATCTTAGAAGGTGCAGGTGGTATTGGTGAGGCTTCCCTTCAATTTGAGGAAGCAGTTGGCCAAAAGGAGAAGCAGGAACAGCAAAATGTGGATACACATCAGGTTTCAAGAGATGGGACTGAAAAGAAAGATTATCCCATTGATCTCTCTATTCCAGATATAAAAAATGGGATCTATAGCACAGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCAAGAGCTTATTCTCATGATTGGACTGAGTGCCCCTATGTTCATCCTGGGGAAAATGCAAGGCGCCGTGATCCGAGGAAATATCAATATAGCTGTGTCCCTTGCCCCGAGTTTCGAAAGGGGTCCTGCAGCAAGGGGGATGCCTGTGAATATGCACATGGTATTTTTGAGTGCTGGCTCCACCCTGCACAATACAGGACACGGCTTTGCAAAGATGAGACAGGATGCTCCAGGAGAGTTTGTTTCTTTGCTCATAAGCTGGAGGAGCTTCGCCCTGTGTATGCTTCCACTGGTTCTGCTATGCCTTCTCCTAGATCGTATTCTGCTAGTACTTCTCCATTGGAACCTTTCACACTGGGCTCTCCATCTGCCTTGATACCACCTGCCTCAACCCCACCTTTAACCCCATCCAGAGTGTCTTCTCCTGCGGGTGGAACCATGTGGCACCCTCATGTTGCAGTTCCTACCCTTCAGCTGCCGCAAAGCAGATTGAAATCTGCACTAACTGCTAGAGATGTTGAATTGGAAATTGATTTGCTTAGGCTTGAAAATCATCAACTTTTGATGCAGCAGCTAATGATGGAAGAGATGGCCGGTCCTTCGTCCCCTTCTAACTGGAAAAATTCCATACCTAATAGTCCATCTCTTCGCAATCATTCTGAGGAGTTCACTAGGTTTGCAGGAGTAAAACCTACAAACCTTGAAGGCATTTTTGGGTCCAAAATGCAATCTCCAACTGGAATCCAAATGCACCAGAATATGAACCAGCAACTTAGAGGCTATCCTTCCAATCTCTCCAATTCTAATGTGATTGGATCGCCCTCATTCAGGGTTAATCCATCTGGGACAGCAGCCACAGTGGCATTTAGTCCAAGAAATGCTGCCTTTGCTAATCAGAGCCAGAGCCTTATTGAGCATAATATGGTTAACTGTGATTTAGGGTTTCCTTCTCATGCTACGTCTCTTGCTGTTGAGACATCTACCTTCTCTGGTTGGAGTTCCCCTGATGGCAAGTTAGATTGGTCCATCCGCGGGGATGAACTAGATAAGCCAAGCAAATCTTCTTTTGGATTTTGA 1812 0.4564 MCSGSKRKPSQTGLIMGDVHGRQDGVHHKISALLEFSAADDVMAFKDAVEKEGHDVDEVGLWYGRRVDSKELCFEERTPLMIAAMFGSKSVLSYILGMGRIDVNRACGSDGATALHCAVAGGSAASLEVIKLLLDASADVSAVDANGNRSCDLVASVSDGVFSSRKRILQSILEGAGGIGEASLQFEEAVGQKEKQEQQNVDTHQVSRDGTEKKDYPIDLSIPDIKNGIYSTDEFRMYTFKVKPCSRAYSHDWTECPYVHPGENARRRDPRKYQYSCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDETGCSRRVCFFAHKLEELRPVYASTGSAMPSPRSYSASTSPLEPFTLGSPSALIPPASTPPLTPSRVSSPAGGTMWHPHVAVPTLQLPQSRLKSALTARDVELEIDLLRLENHQLLMQQLMMEEMAGPSSPSNWKNSIPNSPSLRNHSEEFTRFAGVKPTNLEGIFGSKMQSPTGIQMHQNMNQQLRGYPSNLSNSNVIGSPSFRVNPSGTAATVAFSPRNAAFANQSQSLIEHNMVNCDLGFPSHATSLAVETSTFSGWSSPDGKLDWSIRGDELDKPSKSSFGF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01614 603 PANTHER UNKEMPT FAMILY MEMBER 35 599 IPR045234 -
Pste7g01614 603 FunFam Zinc finger CCCH domain-containing protein 66 232 300 - -
Pste7g01614 603 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 279 299 IPR000571 GO:0046872
Pste7g01614 603 MobiDBLite consensus disorder prediction 190 214 - -
Pste7g01614 603 Pfam Ankyrin repeats (3 copies) 68 143 IPR002110 GO:0005515
Pste7g01614 603 ProSiteProfiles Zinc finger C3H1-type profile. 274 301 IPR000571 GO:0046872
Pste7g01614 603 SMART c3hfinal6 274 300 IPR000571 GO:0046872
Pste7g01614 603 SMART c3hfinal6 309 332 IPR000571 GO:0046872
Pste7g01614 603 Gene3D - 274 337 - -
Pste7g01614 603 ProSiteProfiles Ankyrin repeat region circular profile. 110 144 - -
Pste7g01614 603 SUPERFAMILY Ankyrin repeat 55 155 IPR036770 -
Pste7g01614 603 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515
Pste7g01614 603 Gene3D - 26 169 IPR036770 -
Pste7g01614 603 SMART ANK_2a 110 142 IPR002110 GO:0005515
Pste7g01614 603 SMART ANK_2a 75 105 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01614 Pste-Chr7 14972457 14974268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01614 28 599 C2H2 Transcription Factor Family AT5G12850 41.083 2.39e-137 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste7g01614 Ank_2 6.2e-08 CL0465