Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01611 ATTGGATCATCAAATGAAATAGCTTATGGTTATAGCACACCTTCAAAAATCTATATCCTACATGCTCTAATCATAGTCCATCATTATTCCTTACTCATTAACCAGCACCCAGCAACAACAAACCTCCCAAAGAAAAAAAAAAAACTAAAACAAAACAAAACTATCATCCCCTCATGGATGTGTGCGAGGGTTCAAGTTCAACTATGCGAACGCTTTGTGATGCTTGTGAGAGTGCCGCAGCTATTGTTTTCTGCGCTGCTGATGAGGCTGCCTTGTGCCGTGTTTGTGATGAGAAGGTTCACATGTGTAATAAGCTAGCTAGTCGGCATGTAAGGGTTGGTCTAGCAAGTCCAAGTGATGTGCTGCGCTGTGACATTTGTGAGAATGCTCCTGCTTTCTTCTATTGTGAGACAGATGGAAGTTCTCTTTGTTTGCAGTGTGATATGACGGTTCATGTTGGAGGTAAAAGGACACATGGAAGATATCTTCTTTTTAGGCAGAGAGTTGAGTTTCCAGGAGATAACCCTGGCAATGGTAAGGCAGAAAACCCAGCTTCACAACCTCTGGATCCTAGTGACACTAAAAGAGGACAAAATCCAGTGGCCAAAAAAAAAATGGGAGAAAAACAGCAAAATCACAGGATGCCTCTGGTTCCAACACCAGAACCTGATGCCGATGGGCATGCTATGATGGGAACCAAAATGATTGATTTGAACATGAAGCCTCAGAGAATACATGAAGCAACATCAAATAATCAGGTTAGGGTGCATGGA 773 0.423 MDVCEGSSSTMRTLCDACESAAAIVFCAADEAALCRVCDEKVHMCNKLASRHVRVGLASPSDVLRCDICENAPAFFYCETDGSSLCLQCDMTVHVGGKRTHGRYLLFRQRVEFPGDNPGNGKAENPASQPLDPSDTKRGQNPVAKKKMGEKQQNHRMPLVPTPEPDADGHAMMGTKMIDLNMKPQRIHEATSNNQVRVHG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01611 200 MobiDBLite consensus disorder prediction 122 136 - -
Pste7g01611 200 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Pste7g01611 200 CDD Bbox1_BBX-like 66 106 - -
Pste7g01611 200 Gene3D Classic Zinc Finger 11 101 - -
Pste7g01611 200 ProSiteProfiles Zinc finger B-box type profile. 61 106 IPR000315 GO:0008270
Pste7g01611 200 SMART bboxneu5 10 57 IPR000315 GO:0008270
Pste7g01611 200 SMART bboxneu5 61 106 IPR000315 GO:0008270
Pste7g01611 200 FunFam B-box zinc finger protein 19 12 102 - -
Pste7g01611 200 CDD Bbox1_BBX-like 14 57 - -
Pste7g01611 200 SUPERFAMILY B-box zinc-binding domain 58 96 - -
Pste7g01611 200 MobiDBLite consensus disorder prediction 115 170 - -
Pste7g01611 200 PANTHER B-BOX ZINC FINGER PROTEIN 22 11 157 - -
Pste7g01611 200 Pfam B-box zinc finger 64 101 IPR000315 GO:0008270
Pste7g01611 200 Pfam B-box zinc finger 13 52 IPR000315 GO:0008270
Pste7g01611 200 MobiDBLite consensus disorder prediction 139 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01611 Pste-Chr7 14910342 14912136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01611 11 195 C2C2-CO-like Transcription Factor Family AT4G38960 60.541 8.38e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pste7g01611 zf-B_box 7.6e-08 No_clan