Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01596 GGCAGCTGATCGTTTGACTTGTTGGATATAATGGGTAGGACTTGTACTTATAAAATAATTTGCTGCTGCCAGAGACAAATTATAATTGGAAGAACAGAATAGATGAAATGGAAGCAACGGAGATCATCTTCCTTCTATTTTTTTGTTACAAAAGATGATAAGGAATAGCATTAGCTTCTGCAAATGAAGAAAACAGCAGGTCCCAGTTTGCATCAGTCTAACCAAAGAAAAAAGAATTTTGCTCTTCAAGATAGAGTTGTAGGCACTGGCACGCAGACGCACAATGTTGAGAACCGTAGTGCTTTGACATATTTCAAGTCTTCCTTCGAGAAATTTTTTACATTTCTCTCTGGGAAGAGAAAAACAGACTCAGAAGCCGGGGAAAGTGATGACAGAAAGAATACACACAAAATTAGAGGGGCATCATCTTCCACAGATGTATCTTCTGATAGTTCTAAGAATTCATCAAAATGGGTGTTTTCTCATTCCTCTGCATCACCTGGCACTGCAAGTAGTCAGCTTGGAACGGGTAACTTTACCTTTGAGGAAATTTACAAGGCAACAGCTAAGTTCTCTCTAGATAATAAGATTGGGGAAGGTGCCTTTGGAGCAGTCTATAAGGGAAAGCTCAATGGAACCCTTGTGGCTGTAAAGCGTGCCAAGAAGGATTTACAAAACAAGAACTTAGCTGAGTTCAAGAATGAAATAAACACCTTGTCCAAAATTGAGCACCTGAACCTTGTAAGGTGGTATGGATATTTGGAGCAAGGAGATGAGAAGATTATTGTTGTCGAATATGTTAATAATGGAACTCTGCGGGAACATCTAGATGGTTTTCGGGGAAATGGACTAGAAATTGGTGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAATATCTTAATCACTGACAAACTGAGGGCCAAAGTGGCAGACTTTGGTTTTGCTCGGTTGGGACCACAAGAGCCTGGTGCAACTCATATTTCAACTCAAATTAAAGGAACAGCTGGCTACATGGATCCTGATTACATGCGAACACAACATCTCTCTGTACAAAGTGATGTTTATTCCTTCGGTGTTTTGCTTGTTGAAATGATGACAGGGAGACATCCAATTGAACCACAGAGACCTCTCAGCGAGAGAGTTACAATTAAATGGGCAATGCAGATGTTGAAACAAAAAGAAATTGTGATAGCAATGGATCCAAGACTGCAGAGAAATCCAGTCTCAAACAGGGCAGTATATAAGGTACTCAAGCTAGCTTTTCAATGCCTTGCACCGATGAGACAATCACGTCCTTCTATGAAGAGTTGTCAAGAAATTCTGTGGGATATTCGCAAAGACTTTAGGGAAAGACCATCTTCTCATCCTTCTCCTAGTCCTTACCATTCTGCAGATTTCCCTCAAAGAGATGCTAGGAAGAATAGGCATAGGACATTTGGTATTGAAGATGATAAAGGCTATAAATTTGTATCTGCATAACCAAATTCACATTTGAAGTTTGTTCGTTGACTGTTCTGATAGTCAACACATGTCTACTACAACTATTGTTTGTATAATGTTTATTACTTGAAGCTGTTAGTTTCTGAGGTTTTTCCCTCTTCCATTTTGAAATTCTCAAGGTTTTAGATTGTTGAGACTGGAAGGTAGGGTTTGATTGTGGTCCAAGTGGGTGAGATTGCAAAATAAAGGGAAAATCAGAAGCTTGAATTTCTCTTTATACTGATTTTTTCTCCAGTTCTGCATGTGTTTGTAGCATCCTTTGTATGATAGCTTAGAGTGTTTTGTAAAGTCAATTTGTAAACAAGAAATAGTGAGAATCTCTTTCTTCTTTTTTTTTTTTTATTATTATAAAAGTGAGAATCATTTGATTGACTTCAATAATATGATTGTAATTTTGGATTCGTGGTTAAC 1977 0.3794 MKKTAGPSLHQSNQRKKNFALQDRVVGTGTQTHNVENRSALTYFKSSFEKFFTFLSGKRKTDSEAGESDDRKNTHKIRGASSSTDVSSDSSKNSSKWVFSHSSASPGTASSQLGTGNFTFEEIYKATAKFSLDNKIGEGAFGAVYKGKLNGTLVAVKRAKKDLQNKNLAEFKNEINTLSKIEHLNLVRWYGYLEQGDEKIIVVEYVNNGTLREHLDGFRGNGLEIGERLDIAIDVAHAITYLHMYTDHPIIHRDIKASNILITDKLRAKVADFGFARLGPQEPGATHISTQIKGTAGYMDPDYMRTQHLSVQSDVYSFGVLLVEMMTGRHPIEPQRPLSERVTIKWAMQMLKQKEIVIAMDPRLQRNPVSNRAVYKVLKLAFQCLAPMRQSRPSMKSCQEILWDIRKDFRERPSSHPSPSPYHSADFPQRDARKNRHRTFGIEDDKGYKFVSA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01596 453 MobiDBLite consensus disorder prediction 427 441 - -
Pste7g01596 453 ProSiteProfiles Protein kinase domain profile. 130 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01596 453 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 112 414 - -
Pste7g01596 453 MobiDBLite consensus disorder prediction 1 23 - -
Pste7g01596 453 Gene3D Phosphorylase Kinase; domain 1 90 205 - -
Pste7g01596 453 SMART serkin_6 130 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01596 453 SUPERFAMILY Protein kinase-like (PK-like) 110 404 IPR011009 -
Pste7g01596 453 MobiDBLite consensus disorder prediction 61 92 - -
Pste7g01596 453 Pfam Protein tyrosine and serine/threonine kinase 131 402 IPR001245 GO:0004672|GO:0006468
Pste7g01596 453 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 94 205 - -
Pste7g01596 453 MobiDBLite consensus disorder prediction 410 441 - -
Pste7g01596 453 Gene3D Transferase(Phosphotransferase) domain 1 206 417 - -
Pste7g01596 453 ProSitePatterns Protein kinases ATP-binding region signature. 136 161 IPR017441 GO:0005524
Pste7g01596 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pste7g01596 453 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
Pste7g01596 453 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01596 Pste-Chr7 14736462 14739799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01596 99 444 Trihelix Transcription Factor Family AT1G70460 37.677 2.81e-64 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pste7g01596 PK_Tyr_Ser-Thr 2.2e-51 CL0016