Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01588 CTTTTCTTTTGCTCAGCATCAAGGAAAAGGGAACTTTTTATTATATAGATATATATATAAAAAAAACAGTTTTGTTTTCTAAACAAGCTTTTCTTCTTTTTCCTCTATTCACTCTTCCCTCATAAATTAAGAGTCTTTCTGCTCTTTCCTAATTGGGTTTGTACATTCATTGTCTTTGGCTGCACCCCTTTTGTTCTTCCTTAGCTTCTAATTACTTTCCCAATTGGGGTAAGCTCAAATTGAAGTCACAGAAAGAGTTGTCAGTTTTTCCTCTCTGAAAGTTGTCATTTTTTTGTGGGAATTAATTTTTGCTGGAACTTTGGTGTGTCTGAGTTCCAGTTTAATATCTGGGAGGGAAGTTCATTGGGTTTAGATCTCAAAAGTGGTTTCTAGGGTTTTCTTTTTGGACCGATTAAGTAATAATCTTGAAGCTCAATTTAGAGCATTCCTCTTTGATTTTTTTACAAAGTGGGTCTTTTGTAGATTCCTGAGGAGCATGCCTCCTTTCCTACACATAAAAAAAGGCTATTCTGATTCCTTTAAAAAATGCTTGTTGATTTATCCTTGAGTGTTGTGGTAAAACCTCCACCTCTGCTTCTCACTTATCTCCCTCTCTACCTTCTCTCTCTTTCTCTGAATCAACCCTGCTTCCCATAAAGTTGTTCAATCTTTCTAGTGAAATCTGAGTCTATAAACACATACACCAACCAAACCTTGTTGTACATGCTCCCATAGTTTGTGTGTTTTCTCTGTGACTTTGGTGTGATGAAGTGGGAAATGGAGATCCTTCCTCCTGCATCACCTTATATGTACAACTCCAATTGGCTTTTGGATGATAACAGAACCAACACCAAATGGACCCCTGCTGAGAACAAGCTGTTTGAGAATGCTCTTGCAGTGTATGATAAGGACACACCGGATCGGTGGCACAAAGTAGCTGAGATGATACCAGGAAAGACAGTTATGGATGTGGTGAAGCAGTACAAGGAATTGGAAGCAGATGTCTGTAACATAGAAGCAGGGTTGATCCCAATTCCTGGCTACAGTACCACCACCTCACCCTTCACCTTAGACTGGGTGAACACTCCTGGCTATGATGGCTTCAAAGGAATCACTACTAAGAGATCCTCCTCTGCCAGACCTCCTGAGCAGGAACGGAAGAAAGGTGTGCCATGGACCGAAGAGGAACACAAATTGTTTCTACTGGGGCTGAAGAAGTATGGCAAAGGTGATTGGAGAAACATATCACGCAATTTTGTGATTACTCGAACGCCAACTCAAGTTGCTAGTCATGCTCAGAAGTACTTCATCAGGCAACTTTCTGGAGGCAAAGACAAGAGGAGAGCTAGCATCCACGACATAACAACAGTTAATCTCACAGAAACCTCAAGAACTTCTTCTGATGACAGCAAGAGATCCACTTCGCCGCAGCATTCCACGATGCTCTCACACCAGCAGCCAAATTCTAGTGCTGCGTCAGCCGGATTGAATTTTCAATGGAGCAACCAGCCGAATGCAGGAGTGGCTATGGCTCTCACACCTGCACATGAACAAGTGTTCATGTCCCCTTATGGCCTTAACTCTTATGGATTTAAGGTGCAGGGCCAAAATCTTCACAGGAGTTCTCTTCACGAGTCTTCTTACTTAGGACCTCAGACACCAAACATGGTTTTCCAAATGCAGCCCTCCCATCATTATTCCCATGCATGATGTGGTGGTGGTGGTTGTATTGAATTATTATTATTACTATTATTATTATAATTATTTATGGTAGAACCTTGCAGCAGTGTCTTTTGCTCAGTTCACTAGTACAGTGTCTATGTTTTTTACCTTGTTAATTATGTGAATACCTTACATTAGACAATTAGTCAGTAATTGCCTTCTTGGTATATGAAACGGAAGGAAGGTGTTGAAATTTTGTTTCTTCATCTCATGAAAGGTGAAAGCTTTGAGGCA 1956 0.4075 MKWEMEILPPASPYMYNSNWLLDDNRTNTKWTPAENKLFENALAVYDKDTPDRWHKVAEMIPGKTVMDVVKQYKELEADVCNIEAGLIPIPGYSTTTSPFTLDWVNTPGYDGFKGITTKRSSSARPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETSRTSSDDSKRSTSPQHSTMLSHQQPNSSAASAGLNFQWSNQPNAGVAMALTPAHEQVFMSPYGLNSYGFKVQGQNLHRSSLHESSYLGPQTPNMVFQMQPSHHYSHA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01588 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Pste7g01588 314 SMART sant 133 183 IPR001005 -
Pste7g01588 314 SMART sant 27 79 IPR001005 -
Pste7g01588 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Pste7g01588 314 CDD SANT 30 76 IPR001005 -
Pste7g01588 314 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
Pste7g01588 314 SUPERFAMILY Homeodomain-like 130 184 IPR009057 -
Pste7g01588 314 MobiDBLite consensus disorder prediction 117 136 - -
Pste7g01588 314 FunFam Transcription factor SRM1 23 90 - -
Pste7g01588 314 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Pste7g01588 314 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 249 IPR043363 -
Pste7g01588 314 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Pste7g01588 314 FunFam transcription factor MYB1R1 135 186 - -
Pste7g01588 314 Gene3D - 23 90 - -
Pste7g01588 314 ProSiteProfiles SANT domain profile. 26 76 IPR017884 -
Pste7g01588 314 CDD SANT 136 181 IPR001005 -
Pste7g01588 314 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Pste7g01588 314 Pfam Myb-like DNA-binding domain 30 74 IPR001005 -
Pste7g01588 314 Gene3D - 135 185 - -
Pste7g01588 314 MobiDBLite consensus disorder prediction 201 238 - -
Pste7g01588 314 SUPERFAMILY Homeodomain-like 29 84 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01588 Pste-Chr7 14625986 14628397 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g01588 Myb_DNA-binding 1.6e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01588 7 14625986 14628397 Pste7g01588 7 14625986 14628397 ECH