Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01575 CGTTATCTCACTCCCAAATCCCAATTCCCACGCCTCTTTCAAAAGCTGAAAACACAGAGAATTAATTCGACCAATACAATTTGAACCTGTGTTTTTACATGCTTGCTTCTTTTGTTGTTTTTTTTACATGCTTGCGTCTTTGTCCTTCTTTTTGTTGTTTGTTTCAATATCCTACAACACATAGCGATCGAGTTTTCTGATATGGATTTTGGGCCACAATTGAAGGGCGGGTCACAATGGCGGGGTTGTTCTCATTAGGAGGGCGAGGCAGCAGCAACAACAACAACCAAGATAACAACAACAACGCCAACCAAAGCAGCGAGATTCCTCCAGCGGAGACGCTATTCTGGTACAGCAACAAAAGTGACGACGTTGCGTCCTACCACCGAGGGTTCGAGCTATGGAACCAGCAGGAGGCGCACCACCATCATCATCACCACCACGTGATGTCCTCACATGCGCGTCCGCTCCTGCAGCGAGATCTTTACTCGTCGGGTGTGGGGCCCAGCAGAGGGGTGTCCGATGATCACTCGTCGTCGAGATCGGCGTTCGTGGCGATGCGCGCCGCCGAGGGAGGAATAAGCTGCCAGGACTGCGGCAACCAGGCCAAGAAAGATTGCCCTCACATGCGGTGCAGAACGTGCTGCAAGAGCCGCGGCTACGACTGCCAAACCCATGTCAAAAGCACATGGGTTCCGGCTTCTAAACGCCGCGAGCGCCAGCAGCAGCTAGCGGCGTTGCAAGAACAACAGCAGCAACAACAGCTTCAGAGAGACATTTCAAAACGTCCAAGGGACCCTACGGCTTGCACTCGTTTGCCCTCCTCAGAAGGGCTAGAACAAGGGCATTTTCCTGCTGTGTTGAGTTCTCCAGCGGAGTTCAGGTGCGTGAGGGTTAGCTGCGTGGAGGACACTGATGATCGGTATGCATATCAAACGGCTGTGAACATTGGAGGACATGTGTTCAAAGGAATCCTCTATGACTATGGTCCTGAACATAACAACAATAACAATAGTAATAATAGCAATAATTACATGGCTGGAGAACCCTCTGCTGGTGTTGCAGGTGCTCAACCCTTGAATCTCACTGCTTCTGGGGTTGTCTCTTCTTCTGGTGCAATTGTTGATCCTTCCTCCTTGTATTCGGCTCCGGTTAACACTTTCATGGCTGGTAGTGGTACGCAATTCTTCCCTCACACAAGATCTTGAAAAAGGAAAAAAAGAAAAATGGGAACTGCGTATTGTATCTTCTATCTTTCACCAACTTTGTGTTTCTATCATTTGATGATATTGTTGTTATTAAGAATGAGGCCTAGAGGTAAATTTGACACCCATATTGAAGTGAGAGAGAGAGAAAAAAAAAAAGAAAAGACAGGAGAGAACAAGAGAAAAAGAACATATATATGGATGCTTATTTTTTTTTTTTGTGCAAATTATCAATGCTTAGTTCAAAAATAGATCATTCTTCTTCTCCG 1474 0.4674 MAGLFSLGGRGSSNNNNQDNNNNANQSSEIPPAETLFWYSNKSDDVASYHRGFELWNQQEAHHHHHHHHVMSSHARPLLQRDLYSSGVGPSRGVSDDHSSSRSAFVAMRAAEGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQQLAALQEQQQQQQLQRDISKRPRDPTACTRLPSSEGLEQGHFPAVLSSPAEFRCVRVSCVEDTDDRYAYQTAVNIGGHVFKGILYDYGPEHNNNNNSNNSNNYMAGEPSAGVAGAQPLNLTASGVVSSSGAIVDPSSLYSAPVNTFMAGSGTQFFPHTRS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01575 323 Pfam Domain of unknown function (DUF702) 114 253 - -
Pste7g01575 323 Coils Coil 158 178 - -
Pste7g01575 323 NCBIfam LRP1 C-terminal domain 204 252 IPR006511 -
Pste7g01575 323 MobiDBLite consensus disorder prediction 1 29 - -
Pste7g01575 323 NCBIfam putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Pste7g01575 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 307 IPR007818 GO:0003700|GO:0006355
Pste7g01575 323 MobiDBLite consensus disorder prediction 8 29 - -
Pste7g01575 323 MobiDBLite consensus disorder prediction 167 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01575 Pste-Chr7 14504780 14506900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01575 1 323 C2H2 Transcription Factor Family AT3G51060 44.156 7.35e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pste7g01575 DUF702 2.4e-64 No_clan