Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01573 CATCTTTCATGAAAGGCATAGGAGGTGGAGTTAGAACTGGTAGTGCCATTATTCCACTTCATGGATGTGGAAATATAAGGCTCTCTCACCCTTCTATGCGTTCAGTTGGTCCTCCTTTGACAGCCATAGACAGGTTTTTGTTGGTACAACAAAGCCAATTCTCTCACAAGCAGCAAAAGCCACAGAATGTTGCAAACAATGGCCATGCAAGTGTTTTGGATGCTAGTTTTGCTTGTTCTGGTGGCTCAACCTACAACTTTCTGTGGCCTAATAGTACTCATCAAGAACTGAGTTTTGTTGAACATATGTTAGCAAACGAAGAGGCTCTGAATTGGACACAACAAGTCCCCGCATTGTGCTTAAAAGATGATGTATATCTTTCAGGGAAGAATACCAAAGTGGGGGGACGAAGACCTAAGAAAGCGTCCTCTGTGCCTTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAACTGTTAAGGTTGGTGAAGCAGTACGGTGTAAGAAAATGGTCTCAGATAGCTGATAAGTTGGATGGAAGGGCTGGCAAGCAGTGTAGAGAGAGATGGCATAATCATCTGCGGCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGAATATTAGTAGAAACTCATGCCATGATAGGAAACCGTTGGGCAGAGATTGCAAAACGCATTACAGGAAGAACAGAAAATGCAATAAAGAACCATTGGAATGCCACCAAACGGAGGCAAAAGTCAGAGAGAAAAAACAAAAGAGCAGGAAGCTCAAATGGAAAGCCACGTTCCTCTATTCTCCAAGACTACATCAGAAGGTTGACTCTCCCCAACACCACCACTCCCTCTTTGGAACCACCCCAACTCTCTGATTCTGTTACCAATGAAAATTCCTCATTAATGGCTGAGTCCTATGATGATGAGCTTCTCTTGATGCAACAATTTCTAAAGGAGAATGACAATGTTGAATCTTCTAAGCAATTCAATAAGAATATTGGTGATCAGCTTCTCACTGATGTCACTAAATGTGGGTTAGTTGTTAATTCCAAGCCAAACACAAACTCACATAACAACATGTCCTTGGATGAGAGTCTTTTTATCTCTAGAAAGACTCCTATAGCTACCAACTACCTTGATTCTGATGTCTATCTCTCTCACTTGCTTAATGGAACTGCCGGTTCATCATTTTGCTACAATTATGGGATTCACAACCAGAATATGGAGTTGCGTCGTGGGAAAATTCAAAATTGTTTTGAAGGAAAGAGAAAGATGGATATGATTGAC 1292 0.4141 MKGIGGGVRTGSAIIPLHGCGNIRLSHPSMRSVGPPLTAIDRFLLVQQSQFSHKQQKPQNVANNGHASVLDASFACSGGSTYNFLWPNSTHQELSFVEHMLANEEALNWTQQVPALCLKDDVYLSGKNTKVGGRRPKKASSVPLIKGQWTDEEDRKLLRLVKQYGVRKWSQIADKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAMIGNRWAEIAKRITGRTENAIKNHWNATKRRQKSERKNKRAGSSNGKPRSSILQDYIRRLTLPNTTTPSLEPPQLSDSVTNENSSLMAESYDDELLLMQQFLKENDNVESSKQFNKNIGDQLLTDVTKCGLVVNSKPNTNSHNNMSLDESLFISRKTPIATNYLDSDVYLSHLLNGTAGSSFCYNYGIHNQNMELRRGKIQNCFEGKRKMDMID 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01573 428 PANTHER MYB PROTEIN-RELATED 128 267 - -
Pste7g01573 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 247 IPR017930 -
Pste7g01573 428 Pfam Myb-like DNA-binding domain 149 206 - -
Pste7g01573 428 FunFam Transcriptional activator Myb isoform A 145 198 - -
Pste7g01573 428 CDD SANT 200 243 IPR001005 -
Pste7g01573 428 Gene3D - 145 197 - -
Pste7g01573 428 Gene3D - 200 266 - -
Pste7g01573 428 ProSiteProfiles Myb-like domain profile. 193 243 IPR001005 -
Pste7g01573 428 SMART sant 197 245 IPR001005 -
Pste7g01573 428 SMART sant 145 194 IPR001005 -
Pste7g01573 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 196 IPR017930 -
Pste7g01573 428 SUPERFAMILY Homeodomain-like 143 239 IPR009057 -
Pste7g01573 428 CDD SANT 149 192 IPR001005 -
Pste7g01573 428 ProSiteProfiles Myb-like domain profile. 146 192 IPR001005 -
Pste7g01573 428 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01573 Pste-Chr7 14453291 14455551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01573 30 428 MYB Transcription Factor Family AT5G58850 37.443 3.03e-74 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g01573 Myb_DNA-bind_6 3.8e-20 CL0123