Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01534 TTTATTTTAATTTTCTCTGTTGTTATTATTATTGGCGCAGCTGCTATTAATTATTAATTTCTGGTGCTAAATTGAGAGAACTGTGTGTTTGTGAGAAAGAGAGAGAGAAAGAAGAATCAGGTTAGTTCCTTTGAATTTTCTATCAGAATCTGAGGACCCAAAATCTAGGGTTTTCTGTTCTTCTCTGGGGATCTGAAGACATGCAGTCCAAGTCTGAAACTGCAAATCGACTGAGGTCAGATCCTCATCCCTTTCAACCTGGCAGTGTTTATTCTGAGCCTTGGTGGCGTGGTATTGGGTATAATCCCTTGGCCCAAACAATGGCTGGGGCAAATGCATCTAATTCGTCATCTCTTGAATGTCCTAATGGTGATTCTGAATCCAATGAAGAAGGCCAGTCCTTGTCCAATAGTGGAATGAATGAGGAAGATGATGATGCCACTAAGGATTCGCAGCCCGCTGCTCCTAATGAAACAGGAAATTATGGGCAAGAACAGCAAGGGATGCAGCATACTGCAACATCTGCACCATCCGTGCGTGAAGAATGCCTTACCCAGGCACCACAGCTGGAACTTGTTGGTCACTCAATTGTTAGGGAAATCTTGGTTATAGAATTTATAGTTGCATGCCTTTGGAATGGATTGGACTCTTCAAATTCTTTTGATGCAGGCGTGTGCTACGAATCCTTATCAAGATCCGTATTATGGGGGCATGATGGCAGCTTATGGTCACCAGCAGTTGGAATGCCTCATGCCAGAATGCCTTTGCCCCTTGAGATGGCTCAAGAGCCTGTGTATGTGAATGCCAAACAGTATCAAGGAATTTTGAGGCGAAGACAGGCCCGTGCCAAAGCAGAACTTGAAAAGAAGCTAATAAAATCTAGAAAGCCATATCTGCATGAATCTCGGCATCAGCATGCTATGAGGAGGGCACGGGGTACTGGAGGACGATTTGCAAAGAAATCTGATGCTGAGGGCTCAAACAACTCTGGCAAGGAAAAGGATAATGGTACTGATTCTGTCTTATCATCACAATCAATTAGTTCATCTGGTTCTGAACCTTTGCATTCTGACTCTGCCGATACCTGGAATTCTCCCAACATGCAACAAGATGCAAGAGCTTCAAAAGTGCACAACAGGTTCGAAGCACCAAGTTACCAAAATGGCAGTGGCACCTACCATAGTCATAATGGTTTGCAATACCATTCATCCTCAGGTGAAAGAGTGGAGGAAGGGGACTGTTCGGGTCAGCAACTGAATCACAATTGATGGGAGGTTAGAGGCCGAGGTTGGTTTGTATCTTAGTGACATATTTAGTGAATACCTTGGTTATCTGTAAACATTCTTGGCAATATATGTGCCAAGCGGCAAATCATTCTTGGCTTTGTTCTTGTGTTTGTGGTGTGAATTATATGATGGGGGGAAAGAATGATTGGTGATTGGTGTTTGTGATTTCTGTTGAAGTCAGTCAATCATTTCTTCATTCTTTTCTCGTTTTTGCATTTTGTACAGTTTTATAGTGGTTAGTCAACTCTCCAACCAACATGGAGGGAAAGTCAGATCAGAAGACTACAGTTTGGAGAAAAAAAACTCTTTATGTACCAACACTCGTTTGACTAGTTTTTCTTGTGTCGTTCAACCAGTTCTTAATGTTAACATGAGACATCATAATAGGATAATGAACATGATGTTAGTTACATTTCATTTGTCGGCTATCGTCATTTCAATATTTAGCTTGTAATGGGTCCTTAAGAAAATCAAATTTCCATAGTCTAGC 1776 0.4167 MQSKSETANRLRSDPHPFQPGSVYSEPWWRGIGYNPLAQTMAGANASNSSSLECPNGDSESNEEGQSLSNSGMNEEDDDATKDSQPAAPNETGNYGQEQQGMQHTATSAPSVREECLTQAPQLELVGHSIVREILVIEFIVACLWNGLDSSNSFDAGVCYESLSRSVLWGHDGSLWSPAVGMPHARMPLPLEMAQEPVYVNAKQYQGILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRARGTGGRFAKKSDAEGSNNSGKEKDNGTDSVLSSQSISSSGSEPLHSDSADTWNSPNMQQDARASKVHNRFEAPSYQNGSGTYHSHNGLQYHSSSGERVEEGDCSGQQLNHN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01534 355 MobiDBLite consensus disorder prediction 266 307 - -
Pste7g01534 355 MobiDBLite consensus disorder prediction 314 337 - -
Pste7g01534 355 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 196 251 IPR001289 GO:0003700|GO:0006355
Pste7g01534 355 Gene3D - 194 256 - -
Pste7g01534 355 MobiDBLite consensus disorder prediction 227 355 - -
Pste7g01534 355 MobiDBLite consensus disorder prediction 44 113 - -
Pste7g01534 355 MobiDBLite consensus disorder prediction 44 74 - -
Pste7g01534 355 ProSitePatterns NF-YA/HAP2 subunit signature. 199 219 IPR018362 GO:0003677|GO:0016602
Pste7g01534 355 MobiDBLite consensus disorder prediction 85 113 - -
Pste7g01534 355 MobiDBLite consensus disorder prediction 229 248 - -
Pste7g01534 355 PRINTS CCAAT-binding transcription factor subunit B signature 228 251 IPR001289 GO:0003700|GO:0006355
Pste7g01534 355 PRINTS CCAAT-binding transcription factor subunit B signature 197 219 IPR001289 GO:0003700|GO:0006355
Pste7g01534 355 ProSiteProfiles NF-YA/HAP2 family profile. 194 254 IPR001289 GO:0003700|GO:0006355
Pste7g01534 355 SMART cbf3 193 254 IPR001289 GO:0003700|GO:0006355
Pste7g01534 355 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 26 310 IPR001289 GO:0003700|GO:0006355
Pste7g01534 355 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01534 Pste-Chr7 14078483 14082427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01534 16 298 CCAAT-HAP2 Transcription Factor Family AT5G12840 44.056 3.35e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Pste7g01534 CBFB_NFYA 6.7e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01534 7 14078483 14082427 Pste7g01534 7 14078483 14082427 ECH
Pste7g01534 7 14078483 14082427 Pste8g00208 8 1177971 1182003 PCT