Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01526 GGATTTATTTGGGATAGGAGAATTAAGATATTGAAAAAGCAAAAGACTACAGAAATGGGGCGTATTCCATGCTGTGAGAAAGACAACGTGAAAAGAGGACAGTGGACACCTGAGGAAGATAACAAACTTTCCTCCTACATTGCACAACATGGCACTCGCAACTGGCGCCTCATTCCCAAGAATGCTGGCCTCCAGAGATGTGGTAAGAGCTGCAGACTACGGTGGACTAACTACCTTCGCCCTGATCTCAAACATGGCCAATTCTCGGATTCGGAAGAGCAAACCATTGTGAAACTTCATTCAGTTTTCGGTAACAGATGGTCACTTATAGCAGCCCAGCTGCCAGGACGCACTGACAATGATGTCAAAAACCATTGGAACACCAAGCTGAAAAAGAAACTGTCAGGTATGGGTATTGACCCTGTCACCCACAAGCCATTCTCCCATCTAATGGCTGAAATTGCCACAACATTGGCACCCCCACAGGCAGCTCACCTAGCTGAAGCGGCCCTTGGCTGTTTCAAAGATGAGGTACTCCACCTTCTCACTAAGAAGCCAATTAACTTCCAGGGCCACCATTCCACTGCAGCACTGGGAAATAACTTCACTGATTACATTAATTGTAAGCCAGATGAAAAGGACGCATCTGTTGAGAAGATTAACTTTGATCTATCAAAGGCCATACAACAAGAACCTGAAATGATGCCCTCAAATAAACCATGGGACTCCACCGCAACTACATCTGCAAGTTTTATGATGCCATACAGCGTTTTCCCTGGGTATCAATTCTCTCCAGCATCTTTCGGCAATAAAGGGGATGCATCTCCATGGAGTCAAAGTGTATGCACCGGAAGCACTTGCACAGCCATGGATCAACAGAACCAGTTGCATGAAAAACTTGAAGAGGAAAATGGTGATGAATCTGAGGCTACGAAGGAAATTAGAAATTTATCCAATATATTCAACTCTGATTGTGTTGTGTGGGATCTACCAGCAGATGATTTAATTAACCCCATTGTTTAA 1023 0.4438 GFIWDRRIKILKKQKTTEMGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDSEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKPINFQGHHSTAALGNNFTDYINCKPDEKDASVEKINFDLSKAIQQEPEMMPSNKPWDSTATTSASFMMPYSVFPGYQFSPASFGNKGDASPWSQSVCTGSTCTAMDQQNQLHEKLEEENGDESEATKEIRNLSNIFNSDCVVWDLPADDLINPIV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01526 340 Coils Coil 290 310 - -
Pste7g01526 340 CDD SANT 88 130 IPR001005 -
Pste7g01526 340 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Pste7g01526 340 Pfam Myb-like DNA-binding domain 86 128 IPR001005 -
Pste7g01526 340 SMART sant 84 132 IPR001005 -
Pste7g01526 340 SMART sant 31 81 IPR001005 -
Pste7g01526 340 Gene3D - 32 84 - -
Pste7g01526 340 SUPERFAMILY Homeodomain-like 29 126 IPR009057 -
Pste7g01526 340 PANTHER F14D16.11-RELATED 19 337 - -
Pste7g01526 340 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Pste7g01526 340 FunFam transcription factor MYB80 87 147 - -
Pste7g01526 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 83 IPR017930 -
Pste7g01526 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 134 IPR017930 -
Pste7g01526 340 FunFam Transcription factor RAX3 25 85 - -
Pste7g01526 340 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Pste7g01526 340 CDD SANT 35 79 IPR001005 -
Pste7g01526 340 Gene3D - 86 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01526 Pste-Chr7 14003286 14004495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01526 19 189 MYB Transcription Factor Family AT5G56110 89.474 4.65e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g01526 Myb_DNA-binding 1.8e-15 CL0123