Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01510 CATCACCATCCCACACCAATAAAAGTACAAATCCCTCTCTCTCAAATATTTTATTTCTTTTAATCTCCAAAAAAGGGGTAAAAGCAACACCAAAATCCTTGCGTGTCCAATACCTCTGAAAGAAATTGCAAACTAATCAAAGCCAGAAATAATGCTGTTCAACTCCTTTTCAATTTCTTTGCTGTTTTGGACTAAATAAAAAGAAGAGAAACAGGGGAGGAGTTGCTTGTTCTGTTTTTGAGTGTAAACAGAGTGGAGAAACAGAGGATCTTCATATGAAGAGTGAAGTGACTTGGAGAAGAAAGAGTCAACCTGGGAAAGCCGGGAGAGTTTTTGTTGGAGGGAATTTTAGACTGCATCCATGAAATCACAACAGCACTTGCTTTTGCTGATAGGATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTATCGAAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTATCCGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTCCCAGAAATATCCAATCTTACGAGAGACAACCCCCCAATTGCATCCTTCATTGTTCGGGTGGTTAGTTCTATTGGAGATCGCAAGGCCATCTCACATCCAGAAATAAAGGACAAGGTGCTAAAGAGCAACGAGGATTTTGTTTGGGCAATTGAGGTTCCGCTGACTGGGAAGTTCATTATTGACGTTGAGTTTCTTGATTTGAAGACTGCATCCCCAAACGTATGTTACAAACGACATGTTCCTTTACCTCTGGTTGTCTCTTTCCTATTCATTACAAATGATGATATTTTGAGGCAATCGGGTGAAGAACCTTGTTCCATTTGGGCTGAAGGATTTACGCAGCAAAGATCAAATGCAAAAGCCGTAGAGTCTCTTGGTAGAATGCTAACTGAAGGCATCCACACTGACATCACCATCAATGCTTCTGATGGAAGCATAGGAGCCCATAGAGCTGTTCTTGCTGCTAGATCACCTGTCTTTCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGTCAACCATAAACATCTCAGACATGCCACTTGAATCATGCCAGGCTTTTCTAAATTATCTTTATGGAATCATCAAACATGAAGAGTTTCTGACTCATAGGCTTGCTCTTCTGCATGCAGCTGACAAGTATGACATATCTGACTTGAGAGAAGCATGCCATGACAGTCTTCTAGAAGATATTGACACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCTTTATATCAGTTAATGAAACTGAAGATGAGTTGCATCCGATATCTTGTGAAGTTTGGTAAAATATATGAAATTCGGGATGATTTCAATACCTTCCTGCAAAATGCAGACAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCTTGGAAAGGATTCTGAAGATCTTGCAATTTCAAAGAAGAATAGGAAAGATTTGTGTTATTCACCATACCCAAGAAATAGGTTGTTCCAATTTGTTGTGTAGGATTGTTTTGATGAACCTAATTCTTTCGGTCAGATGGATTTTTTATGATTTTATGTACATACTTATGTTGTG 1621 0.3954 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEISNLTRDNPPIASFIVRVVSSIGDRKAISHPEIKDKVLKSNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNVCYKRHVPLPLVVSFLFITNDDILRQSGEEPCSIWAEGFTQQRSNAKAVESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMPLESCQAFLNYLYGIIKHEEFLTHRLALLHAADKYDISDLREACHDSLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLQNADRDLIAEVFHEVLDAWKGF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01510 355 Gene3D Potassium Channel Kv1.1; Chain A 167 318 IPR011333 -
Pste7g01510 355 ProSiteProfiles BTB domain profile. 190 249 IPR000210 GO:0005515
Pste7g01510 355 SMART BTB_4 190 288 IPR000210 GO:0005515
Pste7g01510 355 Pfam BTB/POZ domain 183 286 IPR000210 GO:0005515
Pste7g01510 355 CDD BTB_POZ_ZBTB_KLHL-like 189 271 - -
Pste7g01510 355 SUPERFAMILY POZ domain 176 286 IPR011333 -
Pste7g01510 355 PANTHER OS08G0495500 PROTEIN-RELATED 5 354 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01510 Pste-Chr7 13828657 13831354 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste7g01510 BTB 5.9e-22 CL0033