Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01507 CTTGTGGTCAAACTGCCACTGCCACGCTGTTTCCTTCTTCTTTCGTCGACTTGGTCCTTTGTCACCCTTCTTCAGTCGCTAATAATTTTCTTCATCTTCCATCTCTATTGTATTGCCTTCTCTAACCTCAGACTAATCTCTTCACCACCCGCATATTCATTTGTGCATATGGGTGCTCTTCTTGATTCTCTTTTCAATCACGTGCCTCGCTTTCACTCAAGATAGAATCTTTCTCCTTTTCTCTTTGGTGGGTTCTCCCAATTCAATGCGCTCCCCTTAATATTCTGCCTTATCATCAATTTTGCTTTATTGGTGGTGTTTATCTTTTTTCCCTTTTCCAATCCTCTCTCTTCCTGTGATCTTTTTGTGGGGTGGGACATTTATGACACATCGGAAGGAAATTGTCAACTGAGAGAAAGTGAGGTTTTGGAGATAATAAGAAAAGATAATGAAACTTGGACACGTGCTACACTTTAATAAAGTTTCTCACGAACCGTGGGGTTTTGTTTTTGTTCATGGTGCTTCTCAGCGGTAGAGATGCACCAAAACGCTGTCTTTCAACTCTCTGAATTCAGCTCCACATCATTAAGTTAGTGGGGATTTCCCTGTTTCGATAAGTGCTGTGTTAACCGCTTCTGGTTTTACTGTTTGAAAGATTTTTTAATCATTGATGGTGGGTACTAATGGCATATTTGGAGTGTGTGATCATGATGGTTTGGAATTAATCAACTTCACTCTGTTCGGAAGGTTTCTTCGTATCATCTTCGCTATATTAGGTACTTTGTTTTTCCCCTTTCGTATGCTATTCTTTAATCCAAGTTCATTTCAAGTTTCAACCCTAAAATTCTGTTTTTGTTTCAGGTTCAAATGGTTTCCAATATACTAAACTTTTGTCTTATGCTTGCTCTATTTTCATGTGATAATCGACTTCATTTTCTTTTTTAATTATGCCTCTTCGTCCTTGTCTTGCATAGTAACACCGGATTTTAATTTTTGTGTAAATTAACTGAATGATGAAAATCAAGATTTTTGTTCAAAGTTGATTTCTACCTAGTAATTTTTTCTTTTTCCATTTTTGGAAAACTAGTTGATTTGAAATAGTGTCGTTTAGGCTTCAGTTCTTATCATGCTTGCTTTCACGTTGGTGCTTTACTTTGTTTTGAGATGAGAACTGCTGTGACACTCTTTTGTGGCGCTTTCATAGTTTTTGGCTTGTAGCTTCGAATTTTGAGCCCGAAGTTTTTACTCTCAATGTTGAAAATAATAAATGAATAGGAGTGAGTCGATAAGATATTTCACATGCGGATACTCCCCTGAATGGGAACTGATAACGGTGAACTGGTAGAGGAATTACCGAATCCTCGCGCCTTCAAGGTACATCGCAAAATGTGCACTCAACTCAGGAAATTAGTTGATAGAATCTTGAGGATAATTCCAGATATAGAAAGAGCACGGCCTTGTGGAATGCAGGTTCTGGCTCTGCTGACCAGTGCGATTGATAAAGCCAAACAACTTCTGCTATACTGCTCCGAATCTAGTAAACTCTACCTGGCTTTAACAGGGAATTCAATACTCTCAAAATTCCAGAGGGCAAGAAAATCGTTAGTGGAAAACTTGGTACAGATTCAGAATATGGTTCCTGTTATTTTGGCTGCAGAGATTTCTCGACTAATTGGTGATCTTGAGTGCATGACATTTGTCCTCAACTCTGCTGAAGAAGCAGCTGGGAAGAGGTTGAAACAATTGCTCCAGGATGATCCTTCAACATCTGATAAAGATTCAAGCGAAACATCTGAAATAAAAGATTTTCAGTTTGTAGCGGCAAGACTTGGTATTACATCCCCAACGGCCTTCATAATAGAGAAACGATCTATTGATAAGTTGCTAAAAAAAGTCAAATCAAATGATCAGCCAAAAGAGATTGTCTTGAAAAATCTTTTGTTTCTCCTGATAAAGCACCGAAAATCAATTACAGGAGAACAAATGGAGGTGTATTTTCAACAAGAAGGACCAATCACAACTGAGAACTCAGGTCATGAGTCCCATGTCAAGTCAGACCCGTACTTGAACCATGGTCATTATGGAACCCATGCTAGTGAGCTGGGTAGACTTACACCTCCTGAGGAATATACATGCCCAATATCTTTAAGGTTAATGTATGACCCTGTTGTCATTGCTTCAGGAGAAACATATGAAAGGATGTGGATACAAAAGTGGTTTTATGAGGGTAATACTATATGCCCGAAAACTAAAAAGAAACTGGATCATATGGCGTTGACTCCAAATGTTGCCTTAAAGGACGACATATTAAATTGGTGTGAAACTAACGGAGTCTCCATTGCTGACCCAAGTAGGAAAGTGCAAGATTTGCAATCATGGGATGCTTCCTCCAATTCCATTAGGAGTTTTGGAAGTTCTTTGTATGATTTGAACTTCCCAATGGATCTTAGTAACATGTCACTTGGATCATTGGATTCCAGTTATAATTCAGATTCCTCCCATGTTAAGGCCAATCATAGCTTAAGTTTGATGTCGAACAAGACTAGTGACAATTCTCTCAGGCGTCAATCTCGTGCACAGATACATAATGCTGATCTGATGCATTTGTCTAAACTCCATGAATGTCAATGGGAATCTCAATGCCAAGTCATTGAAGATATGAAAATAAATATCAGACGCAATTACCAAGCTTTTTGCTCTGTGTCACCTGAGAATTTCATTGACCCACTCACAAGATTTCTGAGCACTGCATGTGAGAATCATGATGTAAAAGCTCTGAGAGTAGGAACTAAGTTGCTATTGGAATTTACAAAGTACTGCAGAAATGGTATGACCAATTTAAGTGAAGATACATGCATTATGTTGGCAAAGCTTCTTAACACAGAAGTGATTGGTGAAGCTCTTGCCATAATGGAAGAACTGACAGGGAATTGGTATGAAAAAGCTAGCATTGCAGCTTCCAGTGTACTCACTTCTGTTTCAAAGATCCTTGATTCAGGTAATGAAGAGCTCCAACGGAAAGCTATTAAAATAATGCATAATTTTTCTTCCAATGTTCAAATTTGCTCCTACATGGTATCTCTCGGGTGCATCCCAAAATTACTGCCATTTTTTGAGGAGAAAACCCTTGTGAGAGACATTATACATATTTTGAAAAATCTTTGTGATACTGAAGAGGGTAGGCTCACTGTTGTTGAAACAAAAGGATGCATATATTCTGTTGTTGAAATACTAGGGACTGGCAGTGATGAAGAAAAAGAAACTGCACTGGTTGTTCTACTCTCTCTATGCTCTCAACGTGTGGAATACTGTCAGTTGGTTATGCACGAGGGGATTATTCCTTCTCTTGTCAACATCTCTAATAAAGGAAGTGATATGGCAAAGGCTTATGCATATGAACTACTACGTCTTTTGAAGGATGTGTATGAGTTTGATAACGAAGATTGTTGTGAGCCAAATCTCAATGCCTCTCAAGAATCAAACAATCACTGTCAAGAAAAGAAATCATCAAAGAAATCGTCAATTTTGAAGAAACTGTCACTCTTCTCAAAATCCAGTTCAGTTACACCAAAAACCAAGAGATGA 3585 0.3835 MGTDNGELVEELPNPRAFKVHRKMCTQLRKLVDRILRIIPDIERARPCGMQVLALLTSAIDKAKQLLLYCSESSKLYLALTGNSILSKFQRARKSLVENLVQIQNMVPVILAAEISRLIGDLECMTFVLNSAEEAAGKRLKQLLQDDPSTSDKDSSETSEIKDFQFVAARLGITSPTAFIIEKRSIDKLLKKVKSNDQPKEIVLKNLLFLLIKHRKSITGEQMEVYFQQEGPITTENSGHESHVKSDPYLNHGHYGTHASELGRLTPPEEYTCPISLRLMYDPVVIASGETYERMWIQKWFYEGNTICPKTKKKLDHMALTPNVALKDDILNWCETNGVSIADPSRKVQDLQSWDASSNSIRSFGSSLYDLNFPMDLSNMSLGSLDSSYNSDSSHVKANHSLSLMSNKTSDNSLRRQSRAQIHNADLMHLSKLHECQWESQCQVIEDMKINIRRNYQAFCSVSPENFIDPLTRFLSTACENHDVKALRVGTKLLLEFTKYCRNGMTNLSEDTCIMLAKLLNTEVIGEALAIMEELTGNWYEKASIAASSVLTSVSKILDSGNEELQRKAIKIMHNFSSNVQICSYMVSLGCIPKLLPFFEEKTLVRDIIHILKNLCDTEEGRLTVVETKGCIYSVVEILGTGSDEEKETALVVLLSLCSQRVEYCQLVMHEGIIPSLVNISNKGSDMAKAYAYELLRLLKDVYEFDNEDCCEPNLNASQESNNHCQEKKSSKKSSILKKLSLFSKSSSVTPKTKR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01507 755 PANTHER U BOX DOMAIN-CONTAINING 23 708 - -
Pste7g01507 755 Pfam U-box domain 268 337 IPR003613 GO:0004842|GO:0016567
Pste7g01507 755 SUPERFAMILY RING/U-box 257 342 - -
Pste7g01507 755 SMART Ubox_2 270 333 IPR003613 GO:0004842|GO:0016567
Pste7g01507 755 Gene3D - 402 710 IPR011989 -
Pste7g01507 755 SUPERFAMILY ARM repeat 521 716 IPR016024 -
Pste7g01507 755 FunFam RING-type E3 ubiquitin transferase 266 338 - -
Pste7g01507 755 ProSiteProfiles U-box domain profile. 266 340 IPR003613 GO:0004842|GO:0016567
Pste7g01507 755 CDD RING-Ubox_PUB 268 317 IPR045210 -
Pste7g01507 755 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 341 IPR013083 -
Pste7g01507 755 SMART arm_5 661 701 IPR000225 GO:0005515
Pste7g01507 755 SMART arm_5 579 617 IPR000225 GO:0005515
Pste7g01507 755 SMART arm_5 618 659 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01507 Pste-Chr7 13807943 13813142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01507 15 702 U-box Gene Family AT4G36550 38.527 5.56e-138 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01507 7 13807943 13813142 Pste7g01507 7 13807943 13813142 ECH
Pste7g01507 7 13807943 13813142 Pste1g02803 1 11748549 11755732 ECH
Pste1g02803 1 11748549 11755732 Pste7g01507 7 13807943 13813142 PCT