Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01505 GAGAATACCAGCCATACAGGTTAATGGTATACTCTCGGAAGTCACCACTCCTTTCCAATTGAAACAAACCTTGGGAACAAGTCACACATTACAATCATCCTAGTCTTCAACAGTCTTTGTTCTTTGTACCTCAGCAAGCAAGCCTCGTTTTTTTCTCTCCTACCTTTTGCCGCAACAAATCTAGAGAGTTAGAGAAACGGTTGAATTGAAGATGAAGATCACTGTCATGACTGCTGATGAGCAAATCATCACGTTGGATGTGGATCCCCATGAATCTGTGGAAAACGTCAAAGCATTGCTCGAGGTTGAGAAGACAAGTGTGCCTCTTCAGCAACAACAGCTTCTTTTTAATGGGAAGGAAGTGAGGAATACGGAGAAGTTGAGTACTCTTGGTGTTAAGGATGATGATTTGCTAATGATGGTGTCTGGTGCTGCAGCTGCCGCTTCTAGTGGATCTACCAATGATTTGAGTTTAAATGTGGACGGATCTGCTGTCAACCCTGGTGCCTTCCAGCAGCATATTAGACGTGATTCTAATTTGATGGGTCAGCTTTTTCAGAGTGATCCAGAGTTGGCACAAGCTATTTTAGGGAATGATTTGAATAGGTTGCAGGAAATTTTACGATTGCGTCATCAGCAAAGAGATGAATTAAAGCGTCAGAAAGAAGAAGAGCTTGCTCTTCTTTATGCTGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATTCGCCAGAAAGGGATCGATGAAAATTGGGCAGCTGCATTAGAGCATAATCCTGAAGCTTTTGCTAGAGTGGTCATGTTGTATGTTGATATGGAGGTTAATGGTGTCCCATTGAAGGCATTTGTTGATAGTGGAGCTCAATCTACCATTATATCAAAAAGCTGTGCTGAGCGTTGTGGATTGTTGAGACTTTTAGATCAACGTTACAGAGGAATTGCTCATGGAGTTGGGCAGTCAGAAATATTGGGTCGTATACATGTAGCTCCTATCAAGATTGGGAGTATATTTTACCCATGCTCATTCTTGGTGCTGGATTCTCCCAATATGGAGTTTCTTTTTGGACTGGATATGCTAAGAAAGCACCAGTGTATAATTGATTTGAAAGAAAATGTTTTGAGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCATCTCGGTTTCTAGATGAGGAAAAGTATGCTAAGGAAGCTTCTGGTTCTGGTGGTCAAGTTGCATCAGGGAGCAACAATCCATCAGCAGGAGGTCGCTCCTCTGGAGGAGCTTCTGGTGACAGGGCTAAGGATTCTGAATTTGAAGCCAAAGTAGCAAAGCTTGTTGAATTGGGATTTGAAAGAAATGCAGTTATACAAGCTCTTCAATTATTCAATGGCAATGAGGAACAGGCAGCTGGGTTTCTTTTTGGGGGTTAGAAACATTTGTCTTGGGAATTGATTGGTTTGTTACTTGAAACAAATTTTACTTTTTAGGCAATTCAATTACAAATTCTAAAAACTATAGGCATGATGGCATTTATTGAGAATTGTTTAAACTGTACGGAATTTTTCTATTTAATCAAAAAACTAATTTGTTGTTACTAA 1609 0.4034 MKITVMTADEQIITLDVDPHESVENVKALLEVEKTSVPLQQQQLLFNGKEVRNTEKLSTLGVKDDDLLMMVSGAAAAASSGSTNDLSLNVDGSAVNPGAFQQHIRRDSNLMGQLFQSDPELAQAILGNDLNRLQEILRLRHQQRDELKRQKEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSRFLDEEKYAKEASGSGGQVASGSNNPSAGGRSSGGASGDRAKDSEFEAKVAKLVELGFERNAVIQALQLFNGNEEQAAGFLFGG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01505 409 CDD Ubl_Ddi1_like 1 71 IPR033882 -
Pste7g01505 409 CDD UBA_scDdi1_like 372 407 - -
Pste7g01505 409 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 406 - -
Pste7g01505 409 Coils Coil 130 153 - -
Pste7g01505 409 SMART uba_6 371 408 IPR015940 -
Pste7g01505 409 Pfam UBA/TS-N domain 372 405 IPR015940 -
Pste7g01505 409 Gene3D - 1 85 - -
Pste7g01505 409 SUPERFAMILY Acid proteases 186 301 IPR021109 -
Pste7g01505 409 SMART ubq_7 1 73 IPR000626 GO:0005515
Pste7g01505 409 MobiDBLite consensus disorder prediction 337 366 - -
Pste7g01505 409 FunFam DNA damage inducible 1 homolog 2 178 325 - -
Pste7g01505 409 CDD RP_DDI 185 308 IPR019103 GO:0004190|GO:0006508
Pste7g01505 409 Pfam Aspartyl protease 178 300 IPR019103 GO:0004190|GO:0006508
Pste7g01505 409 ProSiteProfiles Ubiquitin domain profile. 1 71 IPR000626 GO:0005515
Pste7g01505 409 MobiDBLite consensus disorder prediction 341 357 - -
Pste7g01505 409 Gene3D - 341 409 - -
Pste7g01505 409 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 366 409 IPR015940 -
Pste7g01505 409 Pfam Ubiquitin family 3 71 IPR000626 GO:0005515
Pste7g01505 409 SUPERFAMILY UBA-like 357 409 IPR009060 GO:0005515
Pste7g01505 409 Gene3D Acid Proteases 179 325 IPR021109 -
Pste7g01505 409 SUPERFAMILY Ubiquitin-like 1 81 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01505 1 71 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 32.394 9.57e-07 46.2