Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01491 ATGCCTAGCACTTTGGGTTATAATCTTCCCATTAGAAATTCCTCTTCTTCCAAGTTATCATCACCAATAGGGGAAAGAAATGACCAACCTCCTCAATCTCACACATTAGTTTTCAGTGATCCACCCCAAACTTCACATCATCACTATAATCTCTATCCCCCTTCACTCCCACCAAACCCTCCTCAACTTCCACAACCTCACAGACCCACTAGAGATCCAGATCCAAGTCCTATTTCTCCTCCTGTTACAAGCACTCCCAGAGCAGCACCACCCCAACCACAAACACCAGGAACTTCCGCAACAACATTCAGATACCGAGAATGTCTGAAGAATCATGCTGCAAGCATGGGGGGTCATGTGACAGATGGGTGTGGAGAGTTCATGCCAAATGGAGAAGAGGGCACCCCAGAATCCTTCAAGTGTGCAGCTTGTGATTGCCACCGCAATTTCCACAGAAAAGAACCCGAAGGAGAGTCACAACACGTTCTCAACTACCACCACACTTACCACAACAAAAACATTAGGAACATTATTCATTCTCCACAATCTCATCTTCCGTTTCCTACACCCCACTCTCATCACCTTCATGGGGTGGTGACCACCCCTTCAGGTGGGCCAATTCAGCCCGTGATGTTGGGCTTTGGGGGAGGCCCAGCTGAGTCCTCCAGTGAAGATCTCAACATGTTTCAGACCAGTGATGGAGGGCAGCTGTTATCAGTGCATCCACCACTTTCATCATCCAAGAAGAGGTTCAGGACCAAGTTCACACCGCAACAAAAGGATAAGATGATGGAGTTTGCTGAGAAACTGGAGTGGAAGATCCAGAAACAAGATGAACAGGAGCTTCTTCAGTTTTGCTCTCAGGTTGGTGTAAAAAGACAGGTTTTCAAGGTTTGGATGCACAACAGCAAGCAAGCCATGAAGAAGAAGCAAGTGTAA 939 0.4707 MPSTLGYNLPIRNSSSSKLSSPIGERNDQPPQSHTLVFSDPPQTSHHHYNLYPPSLPPNPPQLPQPHRPTRDPDPSPISPPVTSTPRAAPPQPQTPGTSATTFRYRECLKNHAASMGGHVTDGCGEFMPNGEEGTPESFKCAACDCHRNFHRKEPEGESQHVLNYHHTYHNKNIRNIIHSPQSHLPFPTPHSHHLHGVVTTPSGGPIQPVMLGFGGGPAESSSEDLNMFQTSDGGQLLSVHPPLSSSKKRFRTKFTPQQKDKMMEFAEKLEWKIQKQDEQELLQFCSQVGVKRQVFKVWMHNSKQAMKKKQV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01491 312 Gene3D - 239 309 - -
Pste7g01491 312 MobiDBLite consensus disorder prediction 1 100 - -
Pste7g01491 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 89 305 - -
Pste7g01491 312 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 105 154 IPR006456 -
Pste7g01491 312 MobiDBLite consensus disorder prediction 1 50 - -
Pste7g01491 312 Pfam ZF-HD protein dimerisation region 103 155 IPR006456 -
Pste7g01491 312 MobiDBLite consensus disorder prediction 53 93 - -
Pste7g01491 312 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 104 154 IPR006456 -
Pste7g01491 312 NCBIfam homeobox domain, ZF-HD class 248 305 IPR006455 -
Pste7g01491 312 FunFam Zinc-finger homeodomain protein 2 239 309 - -
Pste7g01491 312 SUPERFAMILY Homeodomain-like 242 309 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01491 Pste-Chr7 13665318 13666256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01491 76 312 ZF-HD Transcription Factor Family AT2G18350 48.571 6.73e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pste7g01491 ZF-HD_dimer 3.3e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01491 7 13665318 13666256 Pste7g01491 7 13665318 13666256 ECH
Pste7g01491 7 13665318 13666256 Pste1g02795 1 11638712 11641201 ECH
Pste1g02795 1 11638712 11641201 Pste7g01491 7 13665318 13666256 PCT