Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01486 GAAGAGAGAGAAAGGAGGAAAGTTCTGAAAAAATTGAACTCCAATTGCTTTCTCAGCAACTCTTACTTCATAGAAAATATAGCTATAGAGGAAGTTGGCCAACGGTTAACTTCCCTCCAAACCCTGAGAGTCTCTTGTAATCAAAGCAAAGTTCAGTAGTCGATTCTTGGTCACCTTCTGAGACTCAAACTTCACCTTCCTGACATACCCTTCATACCAATCTTCCCTTTCTGTTTCCTACCTTCTATATACACTTCATCTCCACCTCTTCTCCTTCACACTCACAAGATTTTTTCACCTCTAAGTCTTTCTTTTCACTATGTTATTGCTAAAGGGTTCATGACATGCCCTTGAAACCTTGGTTTTGTAGCACTAGTTTGATTTGGTGCCAAGTTTCTGAGCTTTGGTGGTGTTGACCCTGAAAATTCTCCAAGTCCAGCATGACATAAGGCTGCTACTTCTTTTGTGGGGTTCAAAAATATTGGAGCTGGTTTCAATTAGTAGACAAATTTGGTTGCTGAATTTCGTGTTCATGAGTCTTCAATAGATGGTATTTTTAAATTAAAGCATATTGAAATTTCTTGAATGCTTCTTCTTGCCTTTTAAATTATCTGCAAGACTTCAAATAAGTTGGCTCTCTCCTACAATTCTTAAATGCTATGTTCAATATTGAGAATCAAACAAGACTTGGTCTCAGGCACACACACGTTTTTCAATTTTGGACTAGTTCTGATCTGAATAGTGAATACACATATAGAGGCAAAAGGGGTACCCTCTAGTCATTTAAGTTGTAAGCTTGATCCCTAAGACAACATTTCCAACCAATTCCCCAATTAGTTGAAGCAGCATGGCTTCATTTCCTTCAAATTCTGCAATAGAATACAGCATGGCCAGTGCACAAAACAGTCATCTTCAAGCTTCCTCACCTTCTTTCATGACTAGAGCGGCCATGAGAATATCTAGATCAAGATGGTTCACCTTCTTAAGAAGAGTATTCCATTACCAAAATGGACCGAGATCCGATCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTGATTGCTTTGTTGGTCCAAATAACAATCACAACATTTACTTTGGCCATTTCAAAGAGTGAGAAACCTATTTGGCCCATGAGGGTGTGGATATCAGGTTATGATATTGGCTGTGTTCTCAATCTTCTGCTACTTGGTGGCCGCTACTATCAACTTCATGTGACTCAAGGGGTTGGTCTTAGCCTTTCTGATTTGGAGCAGCAGAGAAACAATGAAGAATCAAGCACTCTCCTTGGATACAACATGAGTATGGGCTCCTCTGCTAGAGGAGCATCTGATGATCAAATCTCACAACTTCCAAGTTGGAGATATAAAGGGGCTCACACCAACTTGGACCTTACCAATGACTCTCAAAGCAGTGAAAGATTGATCAATGATGATCCTGAATGCTGCATTTGCTTGGCGAAGTACAGAGACAGAGAAGAAGTTAGGCAATTGCCCTGTTCCCATATGTTCCACCTAAAATGTGTGGATCAATGGCTAAGAATTATATCATGCTGCCCTCTTTGCAAACAAGGATTACAAAGGACACGCATAGGAAGTGACAATGTCACGTTGTTCTCTGTATCCTTTCGTGCTCAAATTCAAAGTAGCTTGTTAAGACTGGTTATTCATTTAAGGAGAAGTTTCAATAGAAAAAATATGGAGCCAAAGGTTGACAAAAAGCCCCCTAAGATCCAAGTAAAAATCCCTAAGGTGGACACAGAATCCTTTAAGAAGAACTCACATATGTTAGTGTCACCAACATCTCAAGACATAACTCGAAAAAATTCAAGTGGGAAGTTGAATTGTCTATGCTCACCCACCACACATGTTGGTTCATTTAGATGTCGTCATCATCGGACTTCTAGATCTGAAATGCGTCGTGGGAAATCTGTTGGCTCAAATATTTCTGAATTAGGATCTAAAGCAAGCTCAATTAGTAACCCACTTCATGCTCAATAG 2014 0.3982 MASFPSNSAIEYSMASAQNSHLQASSPSFMTRAAMRISRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALLVQITITTFTLAISKSEKPIWPMRVWISGYDIGCVLNLLLLGGRYYQLHVTQGVGLSLSDLEQQRNNEESSTLLGYNMSMGSSARGASDDQISQLPSWRYKGAHTNLDLTNDSQSSERLINDDPECCICLAKYRDREEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQGLQRTRIGSDNVTLFSVSFRAQIQSSLLRLVIHLRRSFNRKNMEPKVDKKPPKIQVKIPKVDTESFKKNSHMLVSPTSQDITRKNSSGKLNCLCSPTTHVGSFRCRHHRTSRSEMRRGKSVGSNISELGSKASSISNPLHAQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01486 388 MobiDBLite consensus disorder prediction 363 388 - -
Pste7g01486 388 SUPERFAMILY RING/U-box 195 249 - -
Pste7g01486 388 SMART ring_2 204 244 IPR001841 -
Pste7g01486 388 Pfam Ring finger domain 203 245 IPR001841 -
Pste7g01486 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 250 IPR013083 -
Pste7g01486 388 ProSiteProfiles Zinc finger RING-type profile. 204 245 IPR001841 -
Pste7g01486 388 MobiDBLite consensus disorder prediction 352 388 - -
Pste7g01486 388 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 150 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01486 Pste-Chr7 13635193 13642266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01486 149 179 C3H Transcription Factor Family AT5G55970 77.419 6.64e-09 55.1