Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01482 ATGGAAATTGACAGAGAAGACGAGATTGTGGACATGCCAATGTCACCCCCGTTAGTTGCTTCCGTTAACAATGACTTTTGTCACAACAAAGAGTTTATGTCTCAAGCATACCTTCAGAATAAGTTCTCAGAGATTGACATAGAAATTGATGGATCCTATTCCGAACAAAATCGCCCTCTCCCTATATTTCTCAAGTTTGAAGATGTGGAATACAAAGTGAGAAATAGCCAAGCAAGCTCTAATAACCTTGTGAAGACAATGGTGTCAAAGGCAACCACTAAACCCACTGTGGAAAAGGATAGATATAAGAAAATTTTGAAGGGCATCACAGGAAGCATAGGCCCTGGTGAAATTCTTGCTTTAATGGGTCCTTCTGGAAGTGGGAAGACAACCTTGTTGAGAGTTATTGGAGGAAGATTAATTGACAATGTAAAGGGAAAAGTAACTTACAATGATGTTCGTTTTACTTCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAATTAACAGTAGAAGAAACGTTAGTCTTCTCTGCACTCTTGAGGCTTCCAACCAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGATACCACTATCAAGGAGCTGGGCCTTGAAAGATGTCGCCACACCAAAATAGCTGGAGGATATCTCAAAGGAATATCAGGAGGAGAAAGGAAGAGAACATGCATAGGCTATGAAATTCTTGTTGATCCTTCACTATTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCAGTGCAGCAAACAAACTTCTTCTCACTCTTCAAGGACTTGCTAAGGCTGGAAGGACCATAATCACAACAATACACCAACCATCTAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTTATATCTGAAGGTTATCCTATTTACTATGGGAAGGCTAAAGACACAATGGGATACTTTTCATCCTTGAGATTCATCCCACAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACATGGCAACTGGACAAGTGAATGACATAAGTATTCCAATAGATATCTTACAAGATCAAGAATCTGATGACCCATCAAACTTTGTTATTAAATATCTACAACTCAAATACAAGGTTCTACTAGAACCTAAGGAAAAAGAAGAGAACCACAGAGGAACGAGCATACCAGAACATCTTCAATTTGCCATTCAGGTTAAGAAGGAGTGGACATTGAGTTGGTGGGACCAATTTGTGATTCTTTCCAAGAGAACATTCAAAATAAGATGCAAGGACTATTTTGACAAGCTAAGACTAGTTCAAGCACTTGGGGTTGCACTTTTGTTGGGACTCCTTTGGTGGAAATCTTCAACCCATACCGAAGCTCAACTGAGAGATCAGGTTGGTTTAGCATTCTACATCTGTATATTTTGGACATCTTCATGTATATTTGGAGCAGTCTATGTCTTTCCATTTGAGAAGTACTACTTGATAAAAGAAAGGAAAGCTGACATGTATAGATTAAGTGTATATTATGCATGTAGCACTTTATGTGACATGTTGGCACATGTCTTCTATCCAACTTTTTTCATGGTCATCTTGTACTTCATGGCTGGCTTTAAGAGAACAATTGTTTGCTTCTTCCTGACGCTATTCACTATTCTGTTAATTGCCATAACTAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAATTTTGAGTGTTCAAAGAGCAGGAACAGCTGCTTCTTTGATACTTATGTTATTCCTTCTCACAGGTGGCTACTACGTCCAGCACATACCAAAGTTGATGAGGTGGTTGAAGTATTTGTCGTTCATGTACTATGGGTTCAGGCTGCTTCTAAAAGTGCAGTATTCAGGAGATGAATTATATGACTGTGAAAGCAGAGGAGGGTGCAGAACACTGCAGACTTCTCCCACTTTTTCCATTGTCAACTTGAAAGGTGGACTCCAAGAAGTCTGGATCCTGCTTGCCATGGCCTTCCTCTTTCGTTTCTTAGCTTATTTCTCCCTTCGTACTACTATTCATTAATCATTATTCATTAATCATTAATCATTAACCATTAACCATTAACCATTAACCATTAACCATTAATC 2105 0.3924 MEIDREDEIVDMPMSPPLVASVNNDFCHNKEFMSQAYLQNKFSEIDIEIDGSYSEQNRPLPIFLKFEDVEYKVRNSQASSNNLVKTMVSKATTKPTVEKDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLIDNVKGKVTYNDVRFTSAVKRRIGFVTQEDVLFPQLTVEETLVFSALLRLPTNMSKQQKYAKVDTTIKELGLERCRHTKIAGGYLKGISGGERKRTCIGYEILVDPSLLLLDEPTSGLDSSAANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDTMGYFSSLRFIPQIPMNPAEFLLDMATGQVNDISIPIDILQDQESDDPSNFVIKYLQLKYKVLLEPKEKEENHRGTSIPEHLQFAIQVKKEWTLSWWDQFVILSKRTFKIRCKDYFDKLRLVQALGVALLLGLLWWKSSTHTEAQLRDQVGLAFYICIFWTSSCIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTLCDMLAHVFYPTFFMVILYFMAGFKRTIVCFFLTLFTILLIAITSQGAGELFGAAILSVQRAGTAASLILMLFLLTGGYYVQHIPKLMRWLKYLSFMYYGFRLLLKVQYSGDELYDCESRGGCRTLQTSPTFSIVNLKGGLQEVWILLAMAFLFRFLAYFSLRTTIH 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01482 679 CDD ABCG_EPDR 82 310 - -
Pste7g01482 679 Gene3D - 90 322 IPR027417 -
Pste7g01482 679 Pfam ABC-2 type transporter 413 621 IPR013525 GO:0016020|GO:0140359
Pste7g01482 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 320 IPR027417 -
Pste7g01482 679 SMART AAA_5 115 306 IPR003593 GO:0016887
Pste7g01482 679 Pfam ABC transporter 106 256 IPR003439 GO:0005524
Pste7g01482 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 670 - -
Pste7g01482 679 FunFam ABC transporter G family member 22 93 322 - -
Pste7g01482 679 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 328 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01482 Pste-Chr7 13598731 13603410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01482 104 289 Calmodulin-binding Proteins AT2G36910 29.187 3.36e-12 68.2