Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01450 AAAGCGTTATTAACCCTTCTGATCCAACGGACCCTGCTCATTACCTCTCAAACAAACCCTTCCGTTCCGTTTAGCCTTTCCGCTCCCCGCCGGAGCAGCCGTCATCGGCCGCCGACCACCGTATCCGACTCTGTCAATTCACTGATTCCAAGTTCCTCACAAAATTGCTCGGTTCAGTGGTTTCAATTTTCAGGTCTCGAGGATTTCCTTTCAAAAGCGCTTCAATTTGACCCAGACCTATCGAGACAAACCGATTTATTGACTCGAATACTCAGTTTCTATAGACAGCGGTTCAATTTCACGTGTAACAGAGTCAAAGCGATTCGTGGTTCAGCTCCTGCTCCATTCCGTATCAATAATCAAATTCTGAAGAAAACCGCCAGGAGAACAGAATTTGAGATTAAGAACAAGCATCTTCTGCAAACAGCAGTTCAATTTCACCGGTCGAAACCTCAGCGTTATTGGATGGCGGACTCCGACAACGACTCGGGCGGGGCGCACAACGCGGGGAAGAGCAGCGAGATGTCGCCGCGGGAGCAGGACCGGTTTCTTCCGATAGCGAACGTGAGCCGAATAATGAAGAAGGCGCTTCCAGCGAACGCGAAGATCTCGAAGGATGCGAAGGAGACGGTGCAAGAGTGCGTATCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCAGACAAGTGCCAGCGCGAGAAGAGGAAGACGATCAACGGCGACGATCTGCTGTGGGCGATGACAACTCTGGGGTTCGAGGACTACGTGGAGCCTCTGAAGGTGTATCTGCAGCGGTTCAGAGAAATGGAAGGAGAGAAGAGCGTAGCGGCGCGTGACAAGGACGCGCCTCCTGGTGGCAATGCTGCCAACAGTGGCTACGAGAGTGCTAGTTATGGTGGTGGTGGTGGAATCATGATGCATCAGGGACACGTGTACGGCTCTGGTGGGTTCCATCAAGTGGCGGGCGGTGGTGCTGCTATTAAGGGTGGGCCTGCTTATCCCGGGCCTGGATCTAATGCGGGTAGGCCTAGATAG 1035 0.5314 KALLTLLIQRTLLITSQTNPSVPFSLSAPRRSSRHRPPTTVSDSVNSLIPSSSQNCSVQWFQFSGLEDFLSKALQFDPDLSRQTDLLTRILSFYRQRFNFTCNRVKAIRGSAPAPFRINNQILKKTARRTEFEIKNKHLLQTAVQFHRSKPQRYWMADSDNDSGGAHNAGKSSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSVAARDKDAPPGGNAANSGYESASYGGGGGIMMHQGHVYGSGGFHQVAGGGAAIKGGPAYPGPGSNAGRPR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01450 344 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 161 280 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pste7g01450 344 MobiDBLite consensus disorder prediction 325 344 - -
Pste7g01450 344 PRINTS CCAAT-binding transcription factor subunit A signature 211 229 - -
Pste7g01450 344 PRINTS CCAAT-binding transcription factor subunit A signature 249 267 - -
Pste7g01450 344 PRINTS CCAAT-binding transcription factor subunit A signature 230 248 - -
Pste7g01450 344 MobiDBLite consensus disorder prediction 274 293 - -
Pste7g01450 344 SUPERFAMILY Histone-fold 180 281 IPR009072 GO:0046982
Pste7g01450 344 MobiDBLite consensus disorder prediction 24 45 - -
Pste7g01450 344 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 183 247 IPR003958 -
Pste7g01450 344 MobiDBLite consensus disorder prediction 155 180 - -
Pste7g01450 344 FunFam Nuclear transcription factor Y subunit B-3 172 296 - -
Pste7g01450 344 ProSitePatterns NF-YB/HAP3 subunit signature. 214 230 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pste7g01450 344 Gene3D Histone, subunit A 171 292 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01450 Pste-Chr7 13292044 13293427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01450 156 277 CCAAT-HAP3 Transcription Factor Family AT4G14540 86.885 2.30e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pste7g01450 CBFD_NFYB_HMF 5e-27 CL0012