Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01442 AAAAAAACAACACAACTCTGCTGGTTGACTGGTGGATATTAGAGTAGCAGCAGCAAAAGAACTAGCAATTAGAAATAGAAACCCTAAAGAGAAACGAAAGGTGTGGTTGGGTAAATGCTCCGGGTTTGTGAAAAGAGCTATTAGGTTGCCATGCCGGTTGATTTGGACAACGTTTCAGGGGAAGCAGCCACCGTGTCTTCCTCTGCTAATCAAACAAAAGCCGCCCCCAAGAAAAAACGAAACCTCCCTGGCATGCCAGATCCGGAAGCAGAGGTGATTGCTCTGTCACCGAAGACGCTGTTAGCGACGAACCGTTTCGTGTGTGAGATATGCAACAAGGGGTTTCAGAGGGACCAGAATCTGCAGCTTCATCGAAGAGGTCACAACTTGCCGTGGAAGCTGAGGCAGAGGTCCGGCAAAGAGGTGAAAAAGAGAGTGTACGTGTGTCCCGAGCCCACGTGCGTGCACCACGACCCTTCTCGAGCCTTGGGGGACTTGACCGGGATCAAAAAGCACTTCTGCAGGAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCCAAGAAATACGCCGTTCAGTCCGATTGGAAGGCCCACTCCAAGGTCTGCGGCACCAGGGAGTATAAGTGCGATTGCGGAACCGTTTTCTCCAGGAGGGACAGCTTCATCACGCATAGGGCGTTTTGCGATGCGTTGGCCGAGGAGAGTGCGAGATCTCACACTGTTGCCGAGGCTAATTCCCAGAATGATGCAAAGGTTTTAACGGCTCATTCGCCGCCGCCGCCGCCGCAGTCTGATAGTGTTGTGTCCTCTGATTTGCAGACGCAGAACATAGTTTCTGGTGTTTCAGAGTTGCTAGAAAATAATCCCCCGCAAGTCATTGAGGAGCCACAAGCTGTTACAGCTTTAAGTGGGGGCGGTGGCAGCAACAGTAGTAGCAACTGCTCAACAAGCAATGGTGGTGCTACAAGTAGTAGCAGTAGCGTGTTTGCAAGTTTGTTTGCTTCTTCAACAGCATCTGGGACGCTACAATCTCAAACACCAGCATTCAGTGACTTAATTAGAGCCATGGGTCCTCCAGATCAACCTGCAGATATCTCAGGTCCTTCATCATCCGAAGCCATATCTCTTTGCCTCTCCACCAGTACTGCGTCTCCAATTTTTGCAACAGGAGGGCAAGAGCGGCGGCAATATGCCCCATCACCGCAGCCAGCTATGTCAGCCACTGCATTGCTGCAGAAAGCTGCTCAAATGGGTGCAGCCGCCACAAGTGCATCTCTGCTTCGCGGGTTTGGTATTGTATCATCAACTTCAGCTTCAACCTCATCAGGGCTGCAAAGTGGCCTGCAATGGGGTCAGCAGCAATTAGAATCTGAGAGCGGATTGGTTCCTGCAGGGCTTGGACTTGGTCTTCCAAGTGATGGTGGTTCTGGACTAAAGGAATTGATGATGGGAACACCCTCAATGTTTGGCCCTAAACACACCACTCTTGATTTTCTAGGATTGGGGATGGCTGCTGGTGGCACTGCTGGTGGAGGCCTATCTGCACTCATAACATCTATTGGTGGTGGTTTGGATGTCACTGCAGCAGCCTTTGGTAGTGCAGATTTTTCTGCCAAAGATATTAGAAGGAGTTCTTGA 1644 0.5067 MPVDLDNVSGEAATVSSSANQTKAAPKKKRNLPGMPDPEAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVKKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKVCGTREYKCDCGTVFSRRDSFITHRAFCDALAEESARSHTVAEANSQNDAKVLTAHSPPPPPQSDSVVSSDLQTQNIVSGVSELLENNPPQVIEEPQAVTALSGGGGSNSSSNCSTSNGGATSSSSSVFASLFASSTASGTLQSQTPAFSDLIRAMGPPDQPADISGPSSSEAISLCLSTSTASPIFATGGQERRQYAPSPQPAMSATALLQKAAQMGAAATSASLLRGFGIVSSTSASTSSGLQSGLQWGQQQLESESGLVPAGLGLGLPSDGGSGLKELMMGTPSMFGPKHTTLDFLGLGMAAGGTAGGGLSALITSIGGGLDVTAAAFGSADFSAKDIRRSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01442 497 MobiDBLite consensus disorder prediction 252 272 - -
Pste7g01442 497 MobiDBLite consensus disorder prediction 304 323 - -
Pste7g01442 497 SUPERFAMILY beta-beta-alpha zinc fingers 55 152 IPR036236 -
Pste7g01442 497 SMART c2h2final6 132 152 IPR013087 -
Pste7g01442 497 SMART c2h2final6 97 127 IPR013087 -
Pste7g01442 497 SMART c2h2final6 56 78 IPR013087 -
Pste7g01442 497 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Pste7g01442 497 FunFam protein indeterminate-domain 5, chloroplastic-like 110 189 - -
Pste7g01442 497 MobiDBLite consensus disorder prediction 191 224 - -
Pste7g01442 497 MobiDBLite consensus disorder prediction 1 36 - -
Pste7g01442 497 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 12 459 IPR031140 -
Pste7g01442 497 Gene3D Classic Zinc Finger 36 101 - -
Pste7g01442 497 Gene3D Classic Zinc Finger 110 190 - -
Pste7g01442 497 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
Pste7g01442 497 FunFam protein indeterminate-domain 12-like 35 103 - -
Pste7g01442 497 Pfam Zinc finger, C2H2 type 56 78 IPR013087 -
Pste7g01442 497 MobiDBLite consensus disorder prediction 191 205 - -
Pste7g01442 497 MobiDBLite consensus disorder prediction 254 272 - -
Pste7g01442 497 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01442 Pste-Chr7 13206026 13208404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01442 1 495 IDZ Gene Family AT3G50700 57.143 1.01e-171 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste7g01442 zf-C2H2 0.005 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01442 7 13206026 13208404 Pste7g01442 7 13206026 13208404 ECH
Pste7g01442 7 13206026 13208404 Pste1g02666 1 10424362 10428026 ECH
Pste1g02666 1 10424362 10428026 Pste7g01442 7 13206026 13208404 PCT