Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01423 AGGGGACATCTTTCTGTTAACCTGAATAGGGTTCTTCCCAGGAGTGAGGAAACTAAGGCTATTTGTTTGTTAGTGCTAGAAGCTTCTTGCTTTATGACTATGGATTTGTCTGATTGTCCTTTTGGAGTAAGGGTCTGGACTCTTTGCCACTGCTTTGAAGTCAAGTTCATATCTGGTGATCTGTTAACTCCTGTTGGTATTCTCTTTAAGATGGCTGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAGTTTGTTTCTCAGGAGCGTGGTAATCGTGTCGTTCACTATTACCTGAAGGATGCTGCTGGGGAATCCATCCTTGCAGTTGTGGGCACTGAGAGGAGTGTTCGGCACATGTGCTATGTCGTTGCTGAGGAGTTCCTTGAAATTTGTGGTAAGGAGGGTTCCATTCCATCTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGACTGGCTGACATCAACACTATCAAAGCAGAACATGCAGGAAGATAGAAGTGTATCACCTGGGCATAACATGGTACCAGCACATGAGTTCGCAACTGACAGTGTCAATGAAATGACTGGTGTACCTGCGCAAATAACCGATGACAAGGACTTTCCAATGAGTAACTCCAAGTTATCCAATTCAGACATTGTTTGGTCTGGAGTTGCGTGGAGATGTGGCAAACAACTTAAGCATTATCCTGCTTTTTGCAGGAATGGCATCAAAATAGCAATTCAATCCTTTGTTTTTGTTATGGGCAAGGGAGCGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGAGGGCAGAAAAAGGTCAAAGTGAGATGGTTTCACCATAATCAGGAAGTCAAGGGTGTAATTCCTGTACGAAATCCTCATCCTCGTGAAGTTTTTATCACACCTTATTCTCAAGTCCTTAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTAACTCGTGAACACTATGAAAAATGCATGCCTTTTTTTTCACCCACTTCAAGGGACAGAATACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTCAAGCCCTTTGACTTGAGTAAACTGCGTGGCTATTGTGCTCAACCAATTCTTTCTTGCTTGCACCTTGACTCAATCCAGAACCCTGAGAGCCTTGCAGGAGAAGATGAAGAGTTGAGTGCAGGTGACAATGTGAGGGTAGGATCCAAGAGGAGCAGAAGTGAAAAGGGGTCACCTCAGTCTAGGATATGTCACCAGGGAGTTAGGAAGTTAATTAGAACTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTACGCAAAATCAGAAAGGAGATTGCTTTCTCAGAAGGAGGTTGAGTATCAACCATGGTATAACCACACATACAAGGTTGATGACAAGATCGAGTTGCTTTGTCAGGACAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCAGGAAACAGTTGAAAGTCCAATATGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTGCTTTCAAGTTGGCCAGACCTGATAAACTTGGAATGAGGCATTCTGGCCGCCCCACCATCAGGCCAGCCCCAACTCATGAGGAACAAGAATTGGCTGTCAAGGTTGGTAGTGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGGGCTGTAACTGGAATTGACAACTGTGGTGATGATAGTGTTCAAGTCTACTTTTCCGGTGAATGCTTGCTGATGAAAGTTTGCATGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAGGCAAAGCCTGAAATAACTACAAATATATTCACAGCTAATAATAGCTTTAACACAAAGCTTTCCGTGTCCCCATCTATTGTTAAAGATGCGGACTCTGTTGGTTTGGCGAATTCTTGTCATGGTGATCCTGTTAGTAAGAAGTCTAACGAACTGGCTTTGGGAGATGGCTCTGCTGAAGATGGGAACTGTGTCCAGGATAACAAACCCTCTTTGGAAAAAAGTACCCAAGTTGATAATATTGAGATACATGGCAGTTGTGATAATGATGATAATAGTGATGGTAATGAGAACAATAATGATAGCAACGATGACAGTGGTAACAAGAAAGATAATGATAAT 2169 0.4297 RGHLSVNLNRVLPRSEETKAICLLVLEASCFMTMDLSDCPFGVRVWTLCHCFEVKFISGDLLTPVGILFKMAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKEGSIPSGFKWRSRREVVDWLTSTLSKQNMQEDRSVSPGHNMVPAHEFATDSVNEMTGVPAQITDDKDFPMSNSKLSNSDIVWSGVAWRCGKQLKHYPAFCRNGIKIAIQSFVFVMGKGANHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVLSAECVDGPATVLTREHYEKCMPFFSPTSRDRIHLCFRQFRSNKVKPFDLSKLRGYCAQPILSCLHLDSIQNPESLAGEDEELSAGDNVRVGSKRSRSEKGSPQSRICHQGVRKLIRTKQMMVYKTFQVANYAKSERRLLSQKEVEYQPWYNHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLARPDKLGMRHSGRPTIRPAPTHEEQELAVKVGSAVDAWWSDGWWEGAVTGIDNCGDDSVQVYFSGECLLMKVCMKDLRISRDWLGDSWINIKAKPEITTNIFTANNSFNTKLSVSPSIVKDADSVGLANSCHGDPVSKKSNELALGDGSAEDGNCVQDNKPSLEKSTQVDNIEIHGSCDNDDNSDGNENNNDSNDDSGNKKDNDN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01423 723 MobiDBLite consensus disorder prediction 673 692 - -
Pste7g01423 723 Gene3D - 206 363 IPR043151 -
Pste7g01423 723 SMART BAH_4 238 357 IPR001025 GO:0003682
Pste7g01423 723 Pfam BAH domain 241 346 IPR001025 GO:0003682
Pste7g01423 723 MobiDBLite consensus disorder prediction 389 408 - -
Pste7g01423 723 ProSiteProfiles BAH domain profile. 238 357 IPR001025 GO:0003682
Pste7g01423 723 MobiDBLite consensus disorder prediction 665 723 - -
Pste7g01423 723 CDD Tudor_Agenet_AtDUF_rpt1_3 461 521 - -
Pste7g01423 723 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 461 689 - -
Pste7g01423 723 MobiDBLite consensus disorder prediction 382 412 - -
Pste7g01423 723 SMART agenet_At_2 545 603 IPR014002 -
Pste7g01423 723 SMART agenet_At_2 459 524 IPR014002 -
Pste7g01423 723 Pfam Agenet domain 464 538 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01423 Pste-Chr7 13037236 13042825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01423 473 601 PHD Transcription Factor Family AT5G58610 28.571 3.42e-10 61.6