Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01420 CACAACCTTGCATTGCTTCACACACTGCTAGTTCATTCAGAGAGTGAGATAGAATTACTGAACAGCTTCAATGGCGGTTTCTTCCCTCTCTGTAACTCCTCTTTCTCTCTCAAATTCTTCCCCTTCACTATCTTCTAAGCTAAAGTCTCCATCTTTGTGCTTTCTCTCTGGTAACACTTCGAGGGTCACATGCCCAAAACCTCTGCACTCATCAACTGTGGTTCATGTTGCTCCAGAAGCGTTGGATTCTTCCCCTGATCCCTTAGACCCACCTCCAGAAACCCTTGACGATGACTCTGACACCACTTTTCAGGTTGGCGACTTGGGGACTCCTAGCACTTCGGCAATTAGCATCGGAGCTGATGCAGATACAATGGCACCAAAGCAGAAAATTAGAATCAAGCTTAGATCTTACTGGGTACCCTTAATAGAGGATTCCTGCAAGCAGATATTAGACGCAGCAAGGACTACCAATGCGAAAACGATGGGACCTGTGCCATTACCAACCAAGAAGCGAATCTATTGTGTTCTTAAATCTCCACATGTTCATAAGGATGCCCGGTTCCATTTTGAGATCAGAACTCACCAGCGACTCATTGATATTCTATATCCTACAGCTCAAACAATAGATTCTCTGATGCAACTTGATCTTCCTGCTGGTGTGGACGTGGAAGTCAAGCTCTAGAGCTATTGCTTTTGAGGTTTTTAACCATCTTTCTTGAATCTTAGTGGGCTTCACTTTGTTATCAATAGCCAAATTATTGGCAGATATCATGTATTTCACTACCTAAACATCAATGAACAATGGTAAAAGTCCTTTCGTTTGGTTTCCCCTTCTCTCCTCTGCTAGGTTTCAATTAGTTTATTCCTGATTTCCTGTTATTGCATAGGTATTTGTATATCATATACTATGTTATGTAATTTTTATTCTTATATGGCACATGAGAAATGTTATTTTTTCCTCCGGTAAATTATGCTTAAGAAATTATTTTGATTGATTTTAGAGTTATGTACAATGTCATTCTTTTGGCATTTAATTAAGGATTGTTGATTGAT 1056 0.3996 MAVSSLSVTPLSLSNSSPSLSSKLKSPSLCFLSGNTSRVTCPKPLHSSTVVHVAPEALDSSPDPLDPPPETLDDDSDTTFQVGDLGTPSTSAISIGADADTMAPKQKIRIKLRSYWVPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01420 204 PRINTS Ribosomal protein S10 family signature 142 157 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 PRINTS Ribosomal protein S10 family signature 107 120 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 PRINTS Ribosomal protein S10 family signature 163 177 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 FunFam 30S ribosomal protein S10 102 204 - -
Pste7g01420 204 Pfam Ribosomal protein S10p/S20e 109 203 IPR027486 -
Pste7g01420 204 MobiDBLite consensus disorder prediction 74 91 - -
Pste7g01420 204 SMART Ribosomal_S10_2 109 203 IPR027486 -
Pste7g01420 204 Gene3D Ribosomal protein S10 domain 96 204 IPR036838 -
Pste7g01420 204 ProSitePatterns Ribosomal protein S10 signature. 131 146 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 MobiDBLite consensus disorder prediction 56 91 - -
Pste7g01420 204 SUPERFAMILY Ribosomal protein S10 107 204 IPR036838 -
Pste7g01420 204 Hamap 30S ribosomal protein S10 [rpsJ]. 105 204 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 NCBIfam 30S ribosomal protein S10 106 203 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 23 204 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pste7g01420 204 MobiDBLite consensus disorder prediction 1 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01420 106 204 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 31.000 2.83e-08 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01420 7 13026155 13031140 Pste7g01420 7 13026155 13031140 ECH