Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01411 ATGTTGTTTGTCTCATTATCTCAATCTCTTAGAAACTTTGGCAGTAGTTCTCTGACGTTTCTGGTGAAGCCAGTTTTCATGCATGGCTTATCTGGTTTTCTTCATCTGTTGTTGTTCATGGTGCTTTTAGTGTCACTGCTGTGGAAGAAAATCACATTTGGAGCCAGACAAATTTCCAAAGAGAACATTAATAATACCTTGTTTGCAAGGAATCCTTTTTGTTCTCTTGTTGCTTCTGCTCTCAATCTTCTACTCTTTTTGTTTAATTACTTTTGTTGGTACAAAAAGGGCTGGTCAGAAGAAAAGCTTGTGACCCTTTTGGATTTGGTGCTCAAAATGGTTGCTTGGGGTGTTGCTGGTGTTTGCTTGCATAGAGAACTCTTAATTTCAAGGAAAAGAAGATTGTCATTCTTCTTCAGAGCTTGGTGCATCCTTTACCTTTTTGTTTGCGGCTATTGCCTTATAGTTGACATTGTTCTCTATGAAAAGCATGTTGCTGTGCCTATTCAGTTCTTAGTTTCTGATATTTTCTCTGCTTGTGTGGGTTTGTTCTTCAGTTATTTGGGTTTTTTTCTAAAAAATGAGAGTGGAATAAAAGATACTACTCTTCAAGAATCTTTTCTAAATGGTTATTCAAAAGATAGTGATGTGATTGGTTCAAAAGAGACCAAAGTGGGAGACAATGGTACCCCTTACTCTAATGCTGGAATTTTTGGTCTTCTTACCTTTTCTTGGGTTGGTCCTCTGATAGCTGTTGGCAAGAACAAAGCTTTGGACCTCGAAGATGTCCCCCAACTAGACAACAGAGACAGTCTAGTTGGAGTTTATCCAACTTTTAGGGATAAACTTGAGGCATGTTGTGGAGAAAGTAATGCAGTGATAACACCTGAGTTAGTGAAGTCATTAGTATTATCAACCTGGACAGAGATTTTTTTCACAGCTATCCTTGCATTGGTAAATACATTGGCTTCTTTTGTTGGTCCCTATCTCGTTGATGATTTTGTTCAATACCTTAATGGGAAACAACAATTTGAAAATAAGGGCCTTGTTTTGGTGTCTGCTTTTTTTGTCGCAAAGCTTCTGGAGTGCCTGACAAAGAGGCACTGGGCGTTCAAGTTGCAACAGGTTGGAATACGAATGCGAGCATTGCTTGTGACAACTATATATAATAAAGCTTTGAATCTTTCATGTCAATCCAAGAAAGGTCACACTGCAGGGGAAATAATCAATTTAGCGAGTGTTGATGCAGAAAGAGTTGGTGAGTTCAGTTGGCACCTGCATGATCTGTGGTTAGTAGTTCTACAGGTTATTGTAGCCTTGTTAATTTTGTATAGAAATCTCGGACTTGCTTCAATTTCTGGCCTTGTTGCAATTCTCATAGTAATGTGGGCAAACATTCCGTTGGGTTCAATTCAAGAGAAGTTTCACAACAAGTTGATGGAGTCAAAAGATGCAAGAATGAAAGCAACATCTGAGATTTTAAGGAACATGAGGATTCTCAAGCTACAAGGATGGGAATTGAAGTTTTTGTCTAAGATAACTGAACTCAGAAAGATGGAGCAAGGCTGGTTAAAAAAAGTTGTATATACTTTAGCTATGATCATATTTGTATTTTGGTGTGCACCAGCATTTGTGTCATTGGTTACTTTTGGTACTTGTATGCTTGCAGGGATGCCCCTTGAATCAGGGAAGATCTTGTCCACACTTGCAACGTTTCAGATTCTCCAAGAACCCATTTACAATCTTCCGGAGGCAATTTCAATGATGTCACAAACTAAGGTTTCTCTTGACAGGATTGCATCATTCCTTAATCTACATGAGATGCAATCTGATGTTGTAGAGAAGCTTGTACTGGGTAGTTCTAATATGGCAATTGAAGTAGTTAAAGGAAATTTCTCTTGGGATTTGTTTTCTGCAAAAACTACATTAAAAAACATTAATCTCTGTGTTTTTCATGGCATGAGGGTGGCTGTTTGTGGTACTGTGGGATCAGGGAAGTCTACATTACTCTCTTGCATATTGGGAGAAGTACCTAAGAAATCAGGGATTTTGAAGGTGTGTGGAACAAAGGCCTATGTAAGTCAGTCACCATGGATACAAAGTAGCACGATAGAGGATAATATATTGTTTGGGAAGGATATGGAAAGGGAAAGGTATGAGAAGGTACTTGAAGCTTGTTGCTTAAAGAAGGATCTAGATATTTTGTCATTTGGAGATCATACTATTATAGGAGAGAGGGGGATAAATTTGAGTGGTGGACAAAAGCAAAGAATACAAATCGCTCGTGCTGTATACCAAGATGCTGACATATATCTATTTGATGATGTGTTTAGTGCTTTGGATGCTCATACAGGATCTCACCTTTTTAAGGAGTGCTTACTTGGCCTCTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATTTTGGTCATGAAAGATGGGGAAATTACTCAATGTGAAAAATACGATGATCTACTCAACTCGGGCACTGATTTTATGGAACTAGTTGGCGCTCATAAAGAAGCTTTATATGCACTTGATTCAATAGATGGAGGGAAAGAATGTGATAAAATAAGTACATCACAAGAGGATGTAATTTTCTCTATTTCTCTTGGTGTTGAAGAAAAAAAGTTAATAAAAGAAATTCAAAATGATGCAAAAGATGATGACAAATGTGATCCAAAAGGCCAACTTGTCCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTTTATTGGAAATATGTAACAGCTGCATATGGAGGAGCACTTATACCATTCATATTGTTGGCTGAAATATTGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCTATTTCAACTAATGTTGAGCCACCTGTTGGAGGAAGTATGCTTATCCTTGTGTATGTAGGTTTGTCCCTAGGAAGTTCTCTCTGTGTCTTTGCTAGAGCAACGCTTGTTGCTACAATAGGTTATAAGACAGCTACTCTACTCTTCCACAACATGCATTTTTGCATTTTCCATGCTCCAATGTCATTTTTTGATGCCACTCCTAGTGGGAGAATTCTTAACAGGGCTTCTACTGACCAAAGTGCAGTGGATATAGACATTCCTTTTCAAATTGGATCATTTGCTTCCTCTGTGGTCCATCTTCTCGGAGTTATAGTGGTGATGTCTCAAGTTGCATGGCCGGTTTTTATTGTCTTTATTCTTATTACAGTAATCAGCATTAGGTACCAGCAATACTATTTACCATCAGCCCGGGAACTATCACGTTTAGTTGGGGTATGCAAAGCTCCTGTCATTCAACACTTTGCTGAAACAATATCAGGAGCATCAACCATCAAGAGCTTTGATCAGGTATCAAGATTTCGGCAAACAAATATGAAACTGATGGATGGATATTCCCGCCCCAAGTTCAACAATGCTGGTGCAATGGAATGGTTGTGCTTCCGATTAGATTTGTTGTCTTCTATCACATTTGCTTTTTGCTTGATATTCTTGATATCTATTCCCCATGGCTTCATAGATACAGGTGTTACTGGTTTAGCTATAACCTATGGCCTTAATCTGAATATTATGCAATCATGGATGATATGGGAACTTTCCAGCTTGGAGACCAAAATCATATCAGTAGAAAGAATACTTCAGAATACTTCCATTCCTAATGAGCCTCCTCTTGTTGTAGAGGAAAACCGGCCACATGATTCTTGGCCATCATGTGGCAGGATTGATATTCATGACTTGCAGGTACGTTATGCTCCACATATGCCATTTGTGTTGCATGGCCTTACATGCACATTTCATGGAGGATTGAAAACTGGAATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTAATACAAACACTTTTCCGTATTGTTGAGCCTACTGTTGGGAGAATTACGATTGATGGCATCAACATTTCTTCTATTGGACTTCATGATTTGAGGTCTAGACTGAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGCACTGTGAGAAGCAATCTGGATCCACTTGAAGAGTACACAGATGAACAAATATGGGCGGCCCTTGATAAGTGTCAACTTGGAGATGAAGTTAGAAGGAAAGAAGGAAAGCTAGACTCGGCAGTTATTGAGAATGGAGAGAATTGGAGCATGGGCCAGAGACAATTGGTTTGTCTTGGTAGGGTGCTTCTTAAGAAGAGTAAGATCTTGGTGCTAGATGAAGCTACTGCATCAGTGGACACAGCTTCAGATAATATGATTCAGCAAACTCTTAGGCAACATTTCACTGATTGCACAATCATTACAATAGCACATAGAATAACTTCTGTCATTGATAGTCATATGGTTCTGCTACTTAATCAAGGACTTATTGAGGAGTATGATTCCCCAACAAGGTTGCTAGAAGACAAGTTATCTTCTTTTTCTCAACTAGTTGCAGAGTATACCGCAAGGTTAAATTTCTGTTCCAACCAACTAAAATAA 4515 0.3872 MLFVSLSQSLRNFGSSSLTFLVKPVFMHGLSGFLHLLLFMVLLVSLLWKKITFGARQISKENINNTLFARNPFCSLVASALNLLLFLFNYFCWYKKGWSEEKLVTLLDLVLKMVAWGVAGVCLHRELLISRKRRLSFFFRAWCILYLFVCGYCLIVDIVLYEKHVAVPIQFLVSDIFSACVGLFFSYLGFFLKNESGIKDTTLQESFLNGYSKDSDVIGSKETKVGDNGTPYSNAGIFGLLTFSWVGPLIAVGKNKALDLEDVPQLDNRDSLVGVYPTFRDKLEACCGESNAVITPELVKSLVLSTWTEIFFTAILALVNTLASFVGPYLVDDFVQYLNGKQQFENKGLVLVSAFFVAKLLECLTKRHWAFKLQQVGIRMRALLVTTIYNKALNLSCQSKKGHTAGEIINLASVDAERVGEFSWHLHDLWLVVLQVIVALLILYRNLGLASISGLVAILIVMWANIPLGSIQEKFHNKLMESKDARMKATSEILRNMRILKLQGWELKFLSKITELRKMEQGWLKKVVYTLAMIIFVFWCAPAFVSLVTFGTCMLAGMPLESGKILSTLATFQILQEPIYNLPEAISMMSQTKVSLDRIASFLNLHEMQSDVVEKLVLGSSNMAIEVVKGNFSWDLFSAKTTLKNINLCVFHGMRVAVCGTVGSGKSTLLSCILGEVPKKSGILKVCGTKAYVSQSPWIQSSTIEDNILFGKDMERERYEKVLEACCLKKDLDILSFGDHTIIGERGINLSGGQKQRIQIARAVYQDADIYLFDDVFSALDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGEITQCEKYDDLLNSGTDFMELVGAHKEALYALDSIDGGKECDKISTSQEDVIFSISLGVEEKKLIKEIQNDAKDDDKCDPKGQLVQEEEREKGKVGFSVYWKYVTAAYGGALIPFILLAEILFQLLQIGSNYWMAWATPISTNVEPPVGGSMLILVYVGLSLGSSLCVFARATLVATIGYKTATLLFHNMHFCIFHAPMSFFDATPSGRILNRASTDQSAVDIDIPFQIGSFASSVVHLLGVIVVMSQVAWPVFIVFILITVISIRYQQYYLPSARELSRLVGVCKAPVIQHFAETISGASTIKSFDQVSRFRQTNMKLMDGYSRPKFNNAGAMEWLCFRLDLLSSITFAFCLIFLISIPHGFIDTGVTGLAITYGLNLNIMQSWMIWELSSLETKIISVERILQNTSIPNEPPLVVEENRPHDSWPSCGRIDIHDLQVRYAPHMPFVLHGLTCTFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPTVGRITIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWAALDKCQLGDEVRRKEGKLDSAVIENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTASDNMIQQTLRQHFTDCTIITIAHRITSVIDSHMVLLLNQGLIEEYDSPTRLLEDKLSSFSQLVAEYTARLNFCSNQLK 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01411 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01411 1504 Pfam ABC transporter transmembrane region 311 578 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01411 1504 Pfam ABC transporter transmembrane region 940 1180 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01411 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 847 IPR027417 -
Pste7g01411 1504 CDD ABCC_MRP_domain2 1254 1474 - -
Pste7g01411 1504 Gene3D - 601 857 IPR027417 -
Pste7g01411 1504 Pfam ABC transporter 1273 1421 IPR003439 GO:0005524
Pste7g01411 1504 Pfam ABC transporter 643 776 IPR003439 GO:0005524
Pste7g01411 1504 FunFam ABC transporter C family member 5 610 857 - -
Pste7g01411 1504 CDD ABC_6TM_ABCC_D2 937 1229 IPR044726 GO:0140359
Pste7g01411 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 939 1219 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01411 1504 FunFam ABC transporter C family member 5 900 1237 - -
Pste7g01411 1504 Gene3D ABC transporter type 1, transmembrane domain 301 600 IPR036640 GO:0005524|GO:0016020
Pste7g01411 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1490 IPR003439 GO:0005524
Pste7g01411 1504 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Pste7g01411 1504 Gene3D - 1239 1492 IPR027417 -
Pste7g01411 1504 FunFam ABC transporter C family member 3 1239 1491 - -
Pste7g01411 1504 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Pste7g01411 1504 Gene3D ABC transporter type 1, transmembrane domain 900 1236 IPR036640 GO:0005524|GO:0016020
Pste7g01411 1504 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1490 - -
Pste7g01411 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1247 1480 IPR027417 -
Pste7g01411 1504 SMART AAA_5 652 825 IPR003593 GO:0016887
Pste7g01411 1504 SMART AAA_5 1282 1466 IPR003593 GO:0016887
Pste7g01411 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 848 IPR003439 GO:0005524
Pste7g01411 1504 SUPERFAMILY ABC transporter transmembrane region 301 599 IPR036640 GO:0005524|GO:0016020
Pste7g01411 1504 CDD ABCC_MRP_domain1 625 825 - -
Pste7g01411 1504 SUPERFAMILY ABC transporter transmembrane region 936 1237 IPR036640 GO:0005524|GO:0016020
Pste7g01411 1504 FunFam ABC transporter C family member 10 294 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01411 Pste-Chr7 12898892 12906086 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01411 625 853 Calmodulin-binding Proteins AT2G36910 30.522 7.28e-24 107