Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01407 GTATCACGTACTTACTCTTTTGTCTTCTTCCATGATGCACTGTGGGATTCATTTTCTCCTCCAACCAATTTTCACACGTGGGGTGTCTGCTTGTTGTGTGTGTTGTTACTTCTGCTTCTTGTGTCTTGGGTATGGAAGAAAGTTCACGTAGACCATACAGAAAAGAGTGGAAGAAATGAAATCCATAATTCTGGTTTCCTGTACTACAAACATGGTCTAGTTTGTAGCTTATTTATTTGTGTGTTCAACCTTGTGTTATGCTTACTCAGTTACTTTTACTTGTACAAACTTCGTGGTTCAGAGGAGCTTGTCACAGTTTCTGATTTGGCACTCAAAACAGTTGTTTGGGGGTTGTTTGAATTCCAAGGAACAAGATCACAATTTCCCGTTTTTGTTGAGAATTTGGTGGTCTATGCCTTTGTTTCTTGTTCTTGCCTTGCTATTGACTTAGTAGACTGTGAAAAGCATGTTTCCTTGCCAATTATATACCTTGTTTCTGACATAGGTTCTTCTGTTACGGGTTTATTTCTATGTTATGCTGGATATTCTGTTAATAATATGGCTAAGCTTGCCCCTCTTGAAGAGCCCCTTCTGAATAGTGATTCTCAGATAAGTAACAATTCTGATCCCCGTAAGACTAGAGGAAATCGCAATTTAACCCTTTACTCCAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATCAGTCCATTAATAACCCTAGGCAATCAGAAGACTTTAGACCACGAGGACCTCCCACTTCTTGCTACTGCTGACAGTGTCTATGGGATTTTTCCAATTTTTAGAAACAAACTTGAGTCAGAGTGTGGTAGTGTTAGGAATGTGACCACTGTTAAGCTGCTGAAGGTGTTATTCTTGTCAGCATGGCAAGGGATCCTTTTATCAGGTTTGTTTGAATTCATATGCTCATGTTCTTCTTATGTTGGGCCCTTTCTTATAGACAGCCTTGTTCAATACCTCAATGGGGAACACAAGTTTAAAAATGAAGGATATATTTTGGTTGCGGCATTTGTTGCTGCAAAGCTCGTGGAGTGTGTTTCAGAGAGGCAAGGGATGTTTAGGTTCCAGCAGGTTGGGGTAAGGGTGCAATCAGAGTTGGTGGCGATGATCTATGCTAAAGGTTTGACTCTGTCAAACCAATCAAAAGAGGTTCACAGCACGGGCAAAATCATCAACTTAATGACTGTTGATGCTGAAAGGATTGGTGAATTTTGTTGGCACATGCATCAACCATGGATGTGTGTTCTGCAAGTTGCTTTGGCCCTGTTAGTTCTCTATAGAAGTGTAGGGCTTGCTTGTATAGCTGCTCTTGCTGCCACTGTAATTGTGATGTTGCTAAACCTTCCTGTGGCATCATTGCAAGAAAAGTACCAAGACAAATTAATGGAGTTCAAAGATGAAAGAATGAATGCTACGTCAGAGATTCTGAAGAATATGAGAATTCTAAAACTACAAGCATGGGAGATGAAGTTCTTATCAAAGATAATCCAGCTTAGGAAAACTGAGGAGATATGGCTAAAGAAATATGTAGTAGGTACAGCAATTGTTACATTTCTTTTCGAGAATGGCCCAACCTTTATTGCTGTGGTTACTTTTGGTACTTGTGTTCTTATAGGCATCCCACTTGAGTCAGGGAAGGTCTTATCCGCACTTGCAACATTCAGAATTCTTGAAATGCCTATCTTTGGTCTTCCTGACACGATTTCAATGATTGCACAAACTAAGGTTTCCCTTGAAAGGATTGCATCATTTCTTTGTCTTGATGAGTTGCAAACTGATGTAGTAGAGAAGCTTCCATGGGGTAGTTCTGACAAGGCAATTGAATTAATAGATGGGAATTTCTCTTGGGATTTATCTTCCCCTAATCCAACATTGGAAAACATAAATCTCACAGTTTTTCATGGTATGAAGGTTGCTGTATGTGGTACTGTTGGATCAGGCAAGTCCAGTTTACTTTCTTGTATAATAGGGGAAGTACCAAAGATATCTGGGACCCTGAAGATATGTGGAACAAAGGCTTATGTTTCTCAATCACCATGGATACAGAGTGGCAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGACCGGGAAAAGTATGAGAAGGTGCTGGAAGCATGTTCCTTGATAAAAGACCTTGAGATTCTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGAATTAATTTGAGTGGAGGACAGAAGCAAAGAGTGCAAATAGCCCGTGCTTTATACCAAGATGCTGATATATATCTGTTTGATGATCCATTCAGTGCCCTGGATGCTCATACGGGATCCCATCTCTTTAAGGAGTGCTTACTTGGCGTTTTAAAGTCAAAAAGTGTGATATACATAACTCATCAAGTAGAATTCCTACCTGACGCTGATCTAGTATTGGTAATGAGAGAAGGAAAGATAAGTCAATCAGGAAAGTACAATGATATTCTTGGGGCAGGGTCTGATTTTATGGAACTTGTAGATGCACACCGAGCAGCTCTGTCCAGAATTAAGTCATTAGAGAGAAGACCAACATTTAAAAGAACAAGTTCAACCAAGGAGAACACAACTCCATTAAGTGATTTTGAACCTGAGCAAATTGAGGAAAACATTTATGATCAAAATGATATGCTAGATGACACAGTTGAGCCCAAAGGACAACTTGTTCAAGAGGAAGAACGAGAAAAGGGTAGAGTTGGGTTTAATGTCTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTTTCACAGATACTCACTGTGGGGTTTGAAATTGCAAGCAATTATTGGATGACTTTGGCAACTCCTGTTTCAGTAACTGCAGAACCTTATACAGGAAGTTTTACACTTATGGTTGTCTATGTTTCTTTAGCAATTGGAAGTTCCTTTTTCACCCTGGCCAGGGCATTGCTTGCTAGTATAGCTGGATTCAAGACAGCCACCATGCTCTTCAATAAAATGCATTTGTGCGTTTTTCGAGCACCGATATCATTTTTTGACGCCACCCCAAGTGGACGAATCCTTAACAGGGCTTCAACAGACCAAAGTGCACTAGATTTGAGCATTCCAAACCTACTGTGGGAAATTACGCTCTATCTAGTTACACTCTTGGGAAATATTGTTGTAATGTCTCAAGCTGTATGGCAGTCATGGCAGCATGCATATGGTATCAGGGAATTGGCACGATTAGTTGGTACATGTGAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACTACCATAAGAAGTTTTGAGCAAGAGTCTCGATTTAATGACATAAATATGAAATTGATTGATAAATATTCCCAACCCAAATTATACAGTGCTATTGCTATGGAATGGCTGAATTTCAGATTGGATATTTTATCCACTCTCACATTTGCCTTCTGTTTGGTTTTCTTGATATCTTTTCCAAATTCAATAACTACTCCAGGCATTGCGGGATTGGCTGTGACATATGCACTTAATCTAAACGATTTACAATCTAGTATAATCTGGTTTCTTTGCAATGTGGAGAACGAAATTATATCTGTTGAAAGAATACTCCAGTACACTTCCCTTCCAAGTGAAGCTCCTCTTGTGATAAAAGAAAATCAACCCGATTCTTCTTGGCCATCACATGGAGAGGTTCATATCCGGGATTTACAGGTTCGATATGCTCCTCACTTGCCTATTGTTTTACGAGGTCTTACATGCACTTTTACTGCTGGCACAAAAACTGGCATTGTGGGAAGAACAGGAAGTGGAAAAACAACTCTAGTGCAAGCACTTTTCCGACTTATTGAACCTGTTGCTGGAAAAATATTGATAGATAGAATTAACATATCTTTGATTGGAATTCACGATTTGCGGTCTAGAATTAGCATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGACCCACTGGAAGAGTACCCCGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGGAAAAAAGAAGAGAAACTAGACTCAGTAGTTACTGAGAATGGAGAAAATTGGAGTGTGGGTCAAAGGCAGTTGGTCTGCCTTGGCCGTGTTCTACTTAAGAAAAGCAAGATATTAGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCAACAGATAATACTATTCAGCAAATTGTTCAGCAACATTTTTCAGAATGCACCGTCATTACTATTGCTCATAGGATAACTTCAATTATCCATAGGTTGATTGAGGAATATGATTCACCGAAACAACTGCTCAAGAACAAATCATCATCTCTAGCTCAACTAGTTGCAGAGTACACAAGCAGGTCAAACTCTGGTTTTGGAAATTAAATTGAAACTGAATTTGAAATTAGCCTCGAACCACATATGTAATATGTTCTTAATACTGGTATATTTGGTCACCCTTACACTTTGTCTAGTGTCCTACTTTCCTGTAGATATTTTGGTGGTTACACTTTATATTTGTCTTACCAAGACCTGTATATGAGACTCACCCTAAGTCACATATTACTTATGCTCAAATAGATCATGCATACTTTGTGAACTATGACGCATATTACGGCAATGTTGAAGATCTAAGCCTCTGTTTCTAAATCCATCCAAACGCAGGTTCCATGGATGTGAATAATTTTTGCTTTAGAAAAACATGCTTCGAAATGTGTGTTTTTGACATATTAAGTATGGAATGCCATTACGTGAGGTTTTTACACGAGTGTTTGAATAACTATTTGACTTTAAAATGTATATATTTTGAACCTATGTCAAATCGATTAGTTCTGGTCAAGGTTAGAAATTGGATCCTGGTTGCGGTTTAGTTGCTATCTTTGATATCACGGGGAATTGCTAGCAAGTGCAGTTGATGTAGCCATAATTGCGGTTGCAGTGAACCCGAAAGCCTTGATGTTGTGAACAAAATCGCTGTCACAGAGTGCTTTTTAAAACCACGTTTCCATGCAAAGTTCCTATATTCAACACTTAGCGGAAACAATATAAGGGGCATCATCCATCTCGAGCTTTTATCAGGTTTCAAGGTTTCAGCAAACAAATGTGAAACTAATTGATTGATATGTTAAAATTAATATGATGTAAAACTAACTTTTCTAATTTACTATTTACTGCTGTCATTGTGGTTATTTGTTTTCAGCATGTTAACTTATGTCAGTAAGCAATATTTTTTTTATTAGTGGGATTGCGTTTGTCTTATTTTAGAAAATATAGCCCACTAAATGACTGTATGCATGCCTACTGCCGAG 5327 0.3867 VSRTYSFVFFHDALWDSFSPPTNFHTWGVCLLCVLLLLLLVSWVWKKVHVDHTEKSGRNEIHNSGFLYYKHGLVCSLFICVFNLVLCLLSYFYLYKLRGSEELVTVSDLALKTVVWGLFEFQGTRSQFPVFVENLVVYAFVSCSCLAIDLVDCEKHVSLPIIYLVSDIGSSVTGLFLCYAGYSVNNMAKLAPLEEPLLNSDSQISNNSDPRKTRGNRNLTLYSNAGFFSILTFSWISPLITLGNQKTLDHEDLPLLATADSVYGIFPIFRNKLESECGSVRNVTTVKLLKVLFLSAWQGILLSGLFEFICSCSSYVGPFLIDSLVQYLNGEHKFKNEGYILVAAFVAAKLVECVSERQGMFRFQQVGVRVQSELVAMIYAKGLTLSNQSKEVHSTGKIINLMTVDAERIGEFCWHMHQPWMCVLQVALALLVLYRSVGLACIAALAATVIVMLLNLPVASLQEKYQDKLMEFKDERMNATSEILKNMRILKLQAWEMKFLSKIIQLRKTEEIWLKKYVVGTAIVTFLFENGPTFIAVVTFGTCVLIGIPLESGKVLSALATFRILEMPIFGLPDTISMIAQTKVSLERIASFLCLDELQTDVVEKLPWGSSDKAIELIDGNFSWDLSSPNPTLENINLTVFHGMKVAVCGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQSGKIEDNILFGKEMDREKYEKVLEACSLIKDLEILPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSALDAHTGSHLFKECLLGVLKSKSVIYITHQVEFLPDADLVLVMREGKISQSGKYNDILGAGSDFMELVDAHRAALSRIKSLERRPTFKRTSSTKENTTPLSDFEPEQIEENIYDQNDMLDDTVEPKGQLVQEEEREKGRVGFNVYWKYITTAYGGALVPFILLSQILTVGFEIASNYWMTLATPVSVTAEPYTGSFTLMVVYVSLAIGSSFFTLARALLASIAGFKTATMLFNKMHLCVFRAPISFFDATPSGRILNRASTDQSALDLSIPNLLWEITLYLVTLLGNIVVMSQAVWQSWQHAYGIRELARLVGTCEAPVIQHFSETISGSTTIRSFEQESRFNDINMKLIDKYSQPKLYSAIAMEWLNFRLDILSTLTFAFCLVFLISFPNSITTPGIAGLAVTYALNLNDLQSSIIWFLCNVENEIISVERILQYTSLPSEAPLVIKENQPDSSWPSHGEVHIRDLQVRYAPHLPIVLRGLTCTFTAGTKTGIVGRTGSGKTTLVQALFRLIEPVAGKILIDRINISLIGIHDLRSRISIIPQDPTMFEGTVRTNLDPLEEYPDEQIWEALDMCQLGDEVRKKEEKLDSVVTENGENWSVGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNTIQQIVQQHFSECTVITIAHRITSIIHRLIEEYDSPKQLLKNKSSSLAQLVAEYTSRSNSGFGN 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01407 1467 FunFam Multidrug resistance-associated protein member 4 1214 1457 - -
Pste7g01407 1467 Pfam ABC transporter 1248 1395 IPR003439 GO:0005524
Pste7g01407 1467 FunFam ABC transporter C family member 5 889 1211 - -
Pste7g01407 1467 SUPERFAMILY ABC transporter transmembrane region 926 1212 IPR036640 GO:0005524|GO:0016020
Pste7g01407 1467 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 222 1456 - -
Pste7g01407 1467 SUPERFAMILY ABC transporter transmembrane region 294 593 IPR036640 GO:0005524|GO:0016020
Pste7g01407 1467 CDD ABCC_MRP_domain1 615 815 - -
Pste7g01407 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 837 IPR027417 -
Pste7g01407 1467 CDD ABC_6TM_ABCC_D2 926 1205 IPR044726 GO:0140359
Pste7g01407 1467 SMART AAA_5 1256 1447 IPR003593 GO:0016887
Pste7g01407 1467 SMART AAA_5 642 815 IPR003593 GO:0016887
Pste7g01407 1467 Pfam ABC transporter transmembrane region 301 565 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01407 1467 Pfam ABC transporter transmembrane region 928 1065 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01407 1467 Pfam ABC transporter transmembrane region 1085 1156 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01407 1467 CDD ABC_6TM_ABCC_D1 302 589 IPR044746 GO:0140359
Pste7g01407 1467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 301 581 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01407 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1222 1443 IPR027417 -
Pste7g01407 1467 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1230 1455 IPR003439 GO:0005524
Pste7g01407 1467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1193 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g01407 1467 CDD ABCC_MRP_domain2 1228 1439 - -
Pste7g01407 1467 Coils Coil 462 482 - -
Pste7g01407 1467 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 838 IPR003439 GO:0005524
Pste7g01407 1467 FunFam ABC transporter C family member 5 600 847 - -
Pste7g01407 1467 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524|GO:0016887
Pste7g01407 1467 Gene3D ABC transporter type 1, transmembrane domain 890 1211 IPR036640 GO:0005524|GO:0016020
Pste7g01407 1467 Gene3D ABC transporter type 1, transmembrane domain 272 597 IPR036640 GO:0005524|GO:0016020
Pste7g01407 1467 Gene3D - 1213 1457 IPR027417 -
Pste7g01407 1467 Pfam ABC transporter 633 767 IPR003439 GO:0005524
Pste7g01407 1467 FunFam ABC transporter C family member 10 284 597 - -
Pste7g01407 1467 Gene3D - 598 859 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01407 Pste-Chr7 12828419 12835433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01407 615 859 Calmodulin-binding Proteins AT2G36910 31.343 3.94e-27 118