Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01398 ATGCAAACATCTCAGAATCATAAAATTTCTTATGGCTCTGGCAGGTTCTATGTTGAGCCTGTGCAAAATTTGGAGTCATATTGCTTACCATCAAGTGACAACATAGACAATTACTCTTCCTCTGATAACAGCAGCCAAACAACCTACCCTTCTGTCCAAACTTTAGAACAATATTGCACCCTTGAATCTGCTTCCACAAGCAACAGTTTCCCTTGCCAAAATTCTCCACCCACTCTCAGTTTCTCATCCAACAATAGTCCATTGTCAAAGCTAGAATCAAACTCATATGTGTTAAGGCCACAGCATTCTCTTGAAATTGTTAGTGGTTCACCTGAGGATGATTCTTACTTGACACATGACCTTGATGACCTGACACATAAGATAAGAGAGCTGGAAACTGCTATGCTGGGACCTAATGCAGACATGCTAGATATCTATGGTACTGTAATTCCCGAAGAACCTGATTCGTTTTTGTTAGAGGCAGAGAAGTGGAAGAAAATGATGGAGATGACATCCAGAGGGGATTTGAAAGAGATTCTTTATACTTGTGCAAAAGCAATGGCTATGAATGATATGGAGGCAACTGAATGGCTGATGTCAGAGTTGCGTAAGATGGTGTCCATTTCAGGCAGTCCCATTCAGCGATTGGGAGCATACACATTGGAGTCTCTTGTTGCAAGGATGGCCTCTTCAGGAAGCACAATCTACAAATCCTTGAAATGTAGTGAGCCTACCGGTAATGAACTACTTTCATACATGCATGTACTTTATGAAATTTGTCCATACTTCAAGTTTGGGTACATGTCAGCAAATGGAGCAATTGCTGAAGCTCTGAAGGATGAAAATGAAGTACACATAATTGACTTTCAGATTAGCCAGGGAACCCAGTGGGTAAGCCTGATTCAGGCTCTTGCTCGCCGTCCTGGAGGGCCCCCGAAGATCAGAATATCTGGCGTTGATGACTCATTTTCATCTTATGCCCGAGGAGGGGGACTTGATATTGTTGGGAAAAGGTTATCAGCACTTGCACAGTCATGTCATGTACCTTTTGAGTTCAATGCTGTAAGAGTACCTTCTTCTGAGGTGCAACTTGAAGACCTTGAACTTCGGCCTAGTGAAGCTGTGGCTGTAAACTTTGCCATTTGTCTGCACCATGTGCCAGATGAAAGTGTGAACAGTCACAATCATCGTGACCGATTGTTGAGAATGTCTAAGCAATTGTCCCCTAAGGTAGTTACTCTGGTTGAGCAGGAATTTAACACAAACCATGCTCCATTCTTGCAGCGTTTTGTTCAGACAATAAACTACTACTTGACTATTTTTGAATCAATTGATACTGTTCTTCCAAGGGACCACAAAGAGAGGATTAATGTGGAGCAGCATTGTTTGGCTCGCGAAGTTGTCAACTTAATAGCATGTGAAGGAGCAGAAAGAGTTGAACGTCATGAACTTCTGAGCAAGTGGAGAATGCGCTTCACAATGGCTGGATTTACACCTTATCCATTGAGCTCCGTTATTAATTCTTCCATCAAGGATCTTCTGCAGAGCTACAATGGACACTACACTCTAGAAGAGAGAGATGGTGCACTATTTCTTGGTTGGATGAATCAAGTTCTTATTGCTTCTTGTGCTTGGAGATGA 1641 0.4229 MQTSQNHKISYGSGRFYVEPVQNLESYCLPSSDNIDNYSSSDNSSQTTYPSVQTLEQYCTLESASTSNSFPCQNSPPTLSFSSNNSPLSKLESNSYVLRPQHSLEIVSGSPEDDSYLTHDLDDLTHKIRELETAMLGPNADMLDIYGTVIPEEPDSFLLEAEKWKKMMEMTSRGDLKEILYTCAKAMAMNDMEATEWLMSELRKMVSISGSPIQRLGAYTLESLVARMASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEALKDENEVHIIDFQISQGTQWVSLIQALARRPGGPPKIRISGVDDSFSSYARGGGLDIVGKRLSALAQSCHVPFEFNAVRVPSSEVQLEDLELRPSEAVAVNFAICLHHVPDESVNSHNHRDRLLRMSKQLSPKVVTLVEQEFNTNHAPFLQRFVQTINYYLTIFESIDTVLPRDHKERINVEQHCLAREVVNLIACEGAERVERHELLSKWRMRFTMAGFTPYPLSSVINSSIKDLLQSYNGHYTLEERDGALFLGWMNQVLIASCAWR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01398 546 ProSiteProfiles GRAS family profile. 167 546 IPR005202 -
Pste7g01398 546 MobiDBLite consensus disorder prediction 66 86 - -
Pste7g01398 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 132 540 IPR005202 -
Pste7g01398 546 Pfam GRAS domain family 177 546 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01398 Pste-Chr7 12726263 12727903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01398 1 546 GRAS Transcription Factor Family AT1G50600 56.624 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste7g01398 GRAS 7e-130 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01398 7 12726263 12727903 Pste8g00326 8 1762824 1766013 PCT