Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01396 AAGAGGTTTTATCAACTTGCAAATAATATTGCATGGTTGCTTAAGGGATCCAACCGTAAATCTTCAGGAAGAAGATATCATGGGAGATATGGAGATGACAGAATTTCTAACAATCATGACTATTCAGCAGATGATTTGACGGATATTGAGAAAGAAGAAATTGATCGGGCAATAGCACTCTCTCTTTCAGAGGCAGATCAAAAAGGCAAAAAAGTTATTGAGGACGACTCTGATTCTGAAGATGATGAGCTGTGCCCACTTGATGATGAGGAAGATGAATGTGTTCGTGAAGTTCAGCAAGATGAAGAGGACCATCAAGCTAAAATTCAACAGGATGAAGACAAACATCTTGATGAAGTTCAACTTGAGGAAGATGAACAACTTGCCAGGGCAATTCAAGAAAGTTTGGGCATTAGTAGTTCTCCTCCTCGTTCTGACACCGATTCTTTATTTCAACCTTTTGCACACTTATTCCCACCTGTGTACAGAATCTGTGCTGGCTGCAATGCCGAGATTGGCCATGGAAGATTTTTGAGTTGCATGGGAGGTTATTGGCATCCTGAATGTTTTTGTTGCCATGGTTGCAAACTTCCAATCACTGATTATGAGTTTTCCATGTCTGGAAATCGTCGTTATCATAAATCCTGCTATAAGGAGTTGCATCATCCAAGATGTGATGTTTGCAAGAACTTTATTCCACCAAATTCAGCTGGCCTGATTGAGTATAGAGCACATCCTTTCTGGCTACAAAAATATTGTCCATCGCATGAGCGTGATGGTACTCCTCGTTGTTGTAGCTGTCAAAGAATGGAGTCAGTGGATGCCAAATATCTGTTGCTTGATGATGGTCGAAAGCTATGTCTGGAGTGTCTTGACTCAGCTATCATGGATACTCATGAATGCCAACCTCTCTATGTCGAAATACAAGAATTTTATGAAGGTTTACATATGAAGATAGAGCAACAAATTCCTATGCTTTTGGTTGAGAGACAAGCACTTAACGAGGCCATGGAGGGAGAGAAGAATGGCCATCACCACTTACCTGAAACTAGAGGACTTTGCTTGTCTGAAGAGCAAACTATCCCCACCGTAGGGATCTCTTGTGAATTTCAGTGTTCATGGATGATTTTAGTTATTTTAAGGAGACCAAGGATAGGAGCAGGATACCAGCTCATAGATATGATAACTGAGCCTTTTAGGCTGGTCCGTCGTTGTGAAGTGACAGCTATACTCGTTTTGTATGGCCTTCCTAGGTTATTGACTGGATCAATCCTGGCTCATGAAATGATGCATGCATGGCTTAGACTTAAAGGCTATGGTAATCTGAGGCCTGAAGTTGAAGAGGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGAGTCAGAGATCATTCCTGGCTCTGGGAATGATGTTGCATCATCATCATCATCTTCATCTTCCTCATCCTCTTCATCACCATCGTCTTCATCATCAAAGAAGGGTAAACGTTCTGACTTTGAGAAGAAACTTGGTGAGTATTTCAAACACCAGATTGAGTCAGATAGTTCATCAGCTTATGGAGATGGATTCAGAGAAGGTAACCAGGCTGTGCTTAAGGTGCGGATGAAGGAAACCTCAAACTTAGCAGTTGGCACTGTTGGTGTTTCTTCCCAAGATGACATTTATAATGGGAAAGAAAATGGAAAGGGACAG 1692 0.4149 KRFYQLANNIAWLLKGSNRKSSGRRYHGRYGDDRISNNHDYSADDLTDIEKEEIDRAIALSLSEADQKGKKVIEDDSDSEDDELCPLDDEEDECVREVQQDEEDHQAKIQQDEDKHLDEVQLEEDEQLARAIQESLGISSSPPRSDTDSLFQPFAHLFPPVYRICAGCNAEIGHGRFLSCMGGYWHPECFCCHGCKLPITDYEFSMSGNRRYHKSCYKELHHPRCDVCKNFIPPNSAGLIEYRAHPFWLQKYCPSHERDGTPRCCSCQRMESVDAKYLLLDDGRKLCLECLDSAIMDTHECQPLYVEIQEFYEGLHMKIEQQIPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTIPTVGISCEFQCSWMILVILRRPRIGAGYQLIDMITEPFRLVRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYGNLRPEVEEGICQVLAHMWLESEIIPGSGNDVASSSSSSSSSSSSSPSSSSSKKGKRSDFEKKLGEYFKHQIESDSSSAYGDGFREGNQAVLKVRMKETSNLAVGTVGVSSQDDIYNGKENGKGQ 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01396 564 MobiDBLite consensus disorder prediction 19 39 - -
Pste7g01396 564 Pfam LIM domain 165 219 IPR001781 -
Pste7g01396 564 PANTHER PROTEIN DA1-RELATED 2 13 538 IPR045218 -
Pste7g01396 564 MobiDBLite consensus disorder prediction 65 86 - -
Pste7g01396 564 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 192 249 - -
Pste7g01396 564 MobiDBLite consensus disorder prediction 25 39 - -
Pste7g01396 564 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 161 190 - -
Pste7g01396 564 Gene3D Cysteine Rich Protein 161 222 - -
Pste7g01396 564 FunFam Protein DA1-related 1 159 218 - -
Pste7g01396 564 Pfam Ubiquitin interaction motif 123 136 IPR003903 -
Pste7g01396 564 Pfam Ubiquitin interaction motif 50 65 IPR003903 -
Pste7g01396 564 CDD LIM_DA1 165 217 - -
Pste7g01396 564 Pfam Protein DA1 314 538 IPR022087 -
Pste7g01396 564 SMART lim_4 164 216 IPR001781 -
Pste7g01396 564 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 123 142 IPR003903 -
Pste7g01396 564 Coils Coil 95 115 - -
Pste7g01396 564 ProSiteProfiles LIM domain profile. 163 223 IPR001781 -
Pste7g01396 564 ProSitePatterns LIM zinc-binding domain signature. 165 199 IPR001781 -
Pste7g01396 564 MobiDBLite consensus disorder prediction 469 492 - -
Pste7g01396 564 MobiDBLite consensus disorder prediction 469 497 - -
Pste7g01396 564 SMART uim 123 142 IPR003903 -
Pste7g01396 564 SMART uim 49 68 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01396 Pste-Chr7 12721434 12726513 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste7g01396 DA1-like 1.5e-94 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01396 7 12721434 12726513 Pste7g01396 7 12721434 12726513 ECH
Pste7g01396 7 12721434 12726513 Pste1g02584 1 9770463 9779526 ECH
Pste1g02584 1 9770463 9779526 Pste7g01396 7 12721434 12726513 PCT