Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01392 ATGGGAATAGCAACACCTTCGTCAGCACTTCCTTCCATTCTTTCTCACTCCAAGACACATCAACAACACCATTCGAATTCTATGTCCCAAGATTACCACCACCAAGGAATCTTCAGCTTCCCGAATGGGTTTGAAAGATCGGCTACCGCGATGACTCACCAAGACCCCCACCAGCAGCAACAACAGCAGATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTTGAGTCGCAACAAGCTTTAGTATCCATAGAAGAAGACGAATCGGGAAGCCTTCCGGTGTACGAAAACGCGGGGATGTTATCGGAGATGTTCAATTTTCCTCCCGGCGCCGCCGAATTATTGGAACAGCAACAGCAGCAGCAACAGCAAGCAATGACGACGACGTTTCGCGTATCAAGAACAGTGGGCAGTGGTGGCAGCGAGTGGTACGGAAACAGACAAGGGATGTTAACTGGGTTGGGACCGTTGGGAGATTCCAAGAATCATCATCATCATGGCAGTGTGAATAACCGTGACAGTAGCAGCAGCATAGTTCAGCAGCAGCATCATCATCACAACCACCACCATCATCACCATCAGATGTCGAGCATTAATGCAGACTCAGCAGCTGCCATGCACCTTTTCCTCATGAACCCCCAAACCACCAGATCCCCTTCTCCCCCTCCTTCTTCTACTCTCCACATGTTACTTCCCACTTTCCCTCCTGGCTCAGGAGGGTCTTTTGGTCAATTCACATGGCTTCCTGATACTACTCAAGAAGGAGGAGGACCAAGTACCGTTGTGGAAGGCGCTGCTCATGGTCAGGGTCTTTCACTTTCACTTTCTTCCTCCTTGGAAGCGGCCAAAGCGGAGGAGCTGAGGATGGGGGATAGTGGATTTTTGTATTACAATCAACCAAGTGGAGGACCCTCTTCTTATAAGACTACTCTTGGAGGTCATCACCACCAAGCATTGTTGGGACAGACCCATCAGGGACATGTTGGCTTTGGAGCACCAACCTCATCCTCATCATCTTTAGGTGTTGTCAATGCGTTGAGGAATTCCAAGTATGTCAAGGCTGCTCAGGAATTGCTTGAAGAGTTTTGCAGTGTTGGAAGAGGCCAGTTCAAGAAGAACAAGTTCAATAGGCAACTTTCAAACCCTAGTTCCAATCTGGGAGGTAGTGGTGCTGGTGGCGGTGCTTCTTCGTCTTCATCAAAGGATGTTCCTCCCTTATCAGCAGCTGATAGAATTGAGCATCAAAGGAGGAAGGTCAAACTTCTAACCATGCTTGACGAGGCATACTTGCAGGTGGATCGGAGATACAGTCACTACTGCGAGCAAATGCACATGGTGGTGAACTCATTTGACATGGTGATGGGTTTTGGCGCTGCGGTTCCATACACAGCACTAGCTCAGAAAGCAATGTCTCGTCACTTTAGGTGTCTAAAAGATGCCATAACAACTCAGTTGAAGCATAGTTGTGAGCTGTTAGGAGAGAAAGATGGGGCAGGGAACTCAGGCTTGACCAAAGGAGAGACCCCAAGGCTCAAGTTGCTTGAACAAAGTCTGAGACAGCAAAGAGCGTTTCATCAAATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGGTTGCCAGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCAAGGGTTCGTTTGTGGAAACCCATGGTGGAAGACATGTACCAACAAGAACTAAAGGAAGCCGAAGGGGCAGAAGAAGAAAGAGAGAGGAACCAAAGTAGCAGCAACAACAGTGGCCACCAATTGGCACAAACTCCAACGCCCTCAACCACAGCATCGACAGCAACAGCACCACCGCCACCAAATACAACGACGACAATCACAATGACAATGACAACATCGACAGCAGCAGCAACAGGCAAAAGATCCGATCCTGAAAGTGACCCTTCACTTGCGCTAATAAATACTAGCACCGCCACCACTTCAGAAGTGCCCTCATCGTCGGAGCTTCCCCGATCTATGGTGGCCGACGAGTCGTGCAGGCATGGCAGCCTTGTTGCAACCGAGTTTGGGACCGCTTCTGCTGCTTCTGATATTGGTTCCACACTGATTAGATTTGGGACCACCGGTGACGTGTCACTCACACTAGGGCTCCGCCACGCCGGGAACATGCCGGACAAAACTCCCTTCTCCGTTAGGGACTTTGGGGCCCTTTAAACTTAAATCGATTCCCTATATTACTTCACATCATTATAAAGATAATAATGATACGTATAGGATGTTGCTTATTATTACTATTATTATAATAATATAATATGATAATTATGATATCATATATCAAAAACGAACCATTTTTCCGCCCCCTGTAATTTCTCTTTCATGTTAGTTCCTCCTCTCAAAGACCAAAGTTGCATTTTATGGAAGGAAAGAAAGAAGGAAATACCAAACGAGAAGGGTAGTCTTATATGTGATTATCAGCTGGCTAGGTTGACTCTGGTGATCTCCGTGCAACTGTATAGTAGGTTGTTTTCTACTGCTTTTTTTTTTTTACCATGTGTATGTACTTAAGGTTTTGTATCTTAATTTCATAG 2669 0.4706 MGIATPSSALPSILSHSKTHQQHHSNSMSQDYHHQGIFSFPNGFERSATAMTHQDPHQQQQQQIRRDKVRVQGFESQQALVSIEEDESGSLPVYENAGMLSEMFNFPPGAAELLEQQQQQQQQAMTTTFRVSRTVGSGGSEWYGNRQGMLTGLGPLGDSKNHHHHGSVNNRDSSSSIVQQQHHHHNHHHHHHQMSSINADSAAAMHLFLMNPQTTRSPSPPPSSTLHMLLPTFPPGSGGSFGQFTWLPDTTQEGGGPSTVVEGAAHGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNQPSGGPSSYKTTLGGHHHQALLGQTHQGHVGFGAPTSSSSSLGVVNALRNSKYVKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNLGGSGAGGGASSSSSKDVPPLSAADRIEHQRRKVKLLTMLDEAYLQVDRRYSHYCEQMHMVVNSFDMVMGFGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCELLGEKDGAGNSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEEERERNQSSSNNSGHQLAQTPTPSTTASTATAPPPPNTTTTITMTMTTSTAAATGKRSDPESDPSLALINTSTATTSEVPSSSELPRSMVADESCRHGSLVATEFGTASAASDIGSTLIRFGTTGDVSLTLGLRHAGNMPDKTPFSVRDFGAL 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01392 764 Coils Coil 597 620 - -
Pste7g01392 764 SMART HOX_1 534 598 IPR001356 GO:0003677
Pste7g01392 764 CDD homeodomain 534 595 IPR001356 GO:0003677
Pste7g01392 764 MobiDBLite consensus disorder prediction 374 409 - -
Pste7g01392 764 SMART prehox3 339 482 IPR006563 -
Pste7g01392 764 MobiDBLite consensus disorder prediction 1 41 - -
Pste7g01392 764 Gene3D - 537 599 - -
Pste7g01392 764 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 188 621 - -
Pste7g01392 764 MobiDBLite consensus disorder prediction 149 197 - -
Pste7g01392 764 Pfam Homeobox KN domain 551 590 IPR008422 GO:0003677|GO:0006355
Pste7g01392 764 SUPERFAMILY Homeodomain-like 536 601 IPR009057 -
Pste7g01392 764 MobiDBLite consensus disorder prediction 1 36 - -
Pste7g01392 764 MobiDBLite consensus disorder prediction 374 403 - -
Pste7g01392 764 Pfam Associated with HOX 345 481 IPR006563 -
Pste7g01392 764 MobiDBLite consensus disorder prediction 605 653 - -
Pste7g01392 764 MobiDBLite consensus disorder prediction 620 653 - -
Pste7g01392 764 MobiDBLite consensus disorder prediction 605 619 - -
Pste7g01392 764 FunFam BEL1-like homeodomain protein 4 537 599 - -
Pste7g01392 764 ProSiteProfiles 'Homeobox' domain profile. 531 594 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01392 Pste-Chr7 12636255 12643423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01392 339 762 Homeobox Transcription Factor Family AT2G23760 55.324 1.50e-145 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste7g01392 POX 4.2e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01392 7 12636255 12643423 Pste7g01392 7 12636255 12643423 ECH
Pste7g01392 7 12636255 12643423 Pste1g02575 1 9707849 9714758 ECH
Pste1g02575 1 9707849 9714758 Pste7g01392 7 12636255 12643423 PCT