Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01380 ATCCAACATTCTTGTCTTCCACCCTTTCACATAATGCCACAGAGAAAAGGTTGCTGCTTTTTGAATGAGCCTCGTCTTGTTGCCAGGAAATTCTTTGCACGACCTCAGCATGAGGGTGTTGGAGCTGTTGTTAGAAGAAGCATTGGAAGGTTTGAGCTCAAGTATTTTGATCCCTTCCTTGTGTTGGATGAGTTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCCCATAGAGGCTTTGAGACAGTGACATACATGTTGCAGGGAGCTATCACTCATGAAGATTTTGAAGGACATAAGGGGACAATAGAAGCTGTGTGCATAAACGGTTTGAAATGGCAAGCATATATGCCTCTCATCCTTATTCCCGGTGATGATGGTAACTTCAATGATAAAAGGCTACATATTGCTACTTCAAAGTTTGTCAGGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAAGACATAGCAGAAGCTGGGGATGATAGTATCAAAGTTAGAGTTATAGCTGGGGAAGCACTAGGGATAAAGTCTCCAATCTACACAAGGACCCCAACCATGTTCTTGGACTTCTCTCTCAAACCTGGTGGTCACTTGCAGCAACCTATACCAAAATCTTGGAATGCTTTTGTGTATATATTGGAAGGAGAGGGTATCTTTGGAAACATGAAATCTCAGCCTGGAAACTCTCACCATATTCTTCTTCTTGGTTCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAACTCCTTAGGTTCATTTTGGTTGGAGCAGAACCTTTGGGGGAACCAATAGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTTTGCTAACGGATTTGAGAAAGCAAGACATTGGAGATCTGAAAGCGAAATTAATTAATAGATTATTTTTTTATTAGCACCAATCATTAGTTGATTTTCAAATGAAGGAGTGAGGGGAATAATTATTGCAATCCCTCACGTATATAGCGAATAAAATTAATGAATTAAATGAACAATTTTCTTGTTCTTCTTTTTCAATTAACAAATAATTAGTTTAGAAAAAAATGTCCATCCCAAGTTCTAGTAA 1116 0.3925 MPQRKGCCFLNEPRLVARKFFARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAVCINGLKWQAYMPLILIPGDDGNFNDKRLHIATSKFVRIEPRYQEVLSKDIAEAGDDSIKVRVIAGEALGIKSPIYTRTPTMFLDFSLKPGGHLQQPIPKSWNAFVYILEGEGIFGNMKSQPGNSHHILLLGSGDGLEAWNKSSKLLRFILVGAEPLGEPIVQFGPFVMNTQEEIDQTIDDFENFANGFEKARHWRSESEIN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01380 297 PANTHER PIRIN-RELATED 133 294 IPR012093 -
Pste7g01380 297 Pfam Pirin C-terminal cupin domain 178 282 IPR008778 -
Pste7g01380 297 Gene3D Jelly Rolls 134 252 IPR014710 -
Pste7g01380 297 CDD cupin_pirin_C 175 251 - -
Pste7g01380 297 SUPERFAMILY RmlC-like cupins 16 252 IPR011051 -
Pste7g01380 297 Pfam Pirin 33 95 IPR003829 -
Pste7g01380 297 PIRSF Pirin 123 291 IPR012093 -
Pste7g01380 297 PIRSF Pirin 12 101 IPR012093 -
Pste7g01380 297 Gene3D Jelly Rolls 24 103 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01380 Pste-Chr7 12500230 12503846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01380 13 288 Calmodulin-binding Proteins AT3G59220 51.408 6.95e-98 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01380 7 12500230 12503846 Pste7g01380 7 12500230 12503846 ECH
Pste7g01380 7 12500230 12503846 Pste8g00350 8 1868029 1870939 PCT