Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01372 AAAAATGGACGGTTCCAGAAATGGACAACGGAAACAAAGACAAAAAGAAGCGATTGACAAGAAACCAGGTAGAGTTATTGGAGATGAATTTTCAGGAGAAGATGAAGTTGGACCCTGAAAGGAAGATGCAGCTTTCGATGGAACTAAGCCTTCAGCCGCGCCAAATTGCTGTGTGGTTCCAAAATAGACGTGCAAGGTGGAAGAACAAGCAGCTTGAGCATTCGTACAATGTGCTTAAACACCAATATGATGAGATCTCCAAGGAAAACGAGAAGCTTCAAGAAGAGGTTATAAAGTTGAATGCAATGCTAAGTAAAGAGCAACCTTTTAAGACGCATCCATTCGGTGGTTATACCGAAATGCGTGGAGAAGAAATAGTTGAAAGCATGTCAAAGACTCTAAGGGGTTCCAACAAGACACGGAAAAAGAGTAACATTGAGAACGTTGTAGATCAGAGCCTCTGTTCTTTCATTGTGGAGGATAACAACACAGTTTCACTGCCTCATTGCCACGGCCTTTTGCCCCATATTAGTTATTATGAACAAATT 548 0.4142 MDNGNKDKKKRLTRNQVELLEMNFQEKMKLDPERKMQLSMELSLQPRQIAVWFQNRRARWKNKQLEHSYNVLKHQYDEISKENEKLQEEVIKLNAMLSKEQPFKTHPFGGYTEMRGEEIVESMSKTLRGSNKTRKKSNIENVVDQSLCSFIVEDNNTVSLPHCHGLLPHISYYEQI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01372 176 ProSiteProfiles 'Homeobox' domain profile. 3 63 IPR001356 GO:0003677
Pste7g01372 176 ProSitePatterns 'Homeobox' domain signature. 38 61 IPR017970 GO:0000981|GO:0006355
Pste7g01372 176 SUPERFAMILY Homeodomain-like 4 73 IPR009057 -
Pste7g01372 176 SMART HOX_1 5 67 IPR001356 GO:0003677
Pste7g01372 176 Coils Coil 62 96 - -
Pste7g01372 176 CDD homeodomain 6 64 IPR001356 GO:0003677
Pste7g01372 176 Gene3D - 2 71 - -
Pste7g01372 176 Pfam Homeodomain 7 62 IPR001356 GO:0003677
Pste7g01372 176 Pfam Homeobox associated leucine zipper 63 97 IPR003106 GO:0006355|GO:0043565
Pste7g01372 176 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 6 125 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01372 Pste-Chr7 12416207 12418008 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01372 3 104 Homeobox Transcription Factor Family AT2G36610 55.455 2.23e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste7g01372 Homeodomain 1.7e-16 CL0123