Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01356 ATGCGGAAATTTCTTGCATTCCCAAAACGGCACAAGTATCGTCATTCTCTTCAAAACGACACTTGCAAGCATTGCGATTCACTGATTCATCATTCTTCTCCAAAACGACAGAGTGCCCCGAAGGGAAATTCTGAAATGGAAACGTCAAAACCCTCTCAATCCGCAATGGATTTTCCTCCCTACCATCGATCACACTTGCGTAGCAACACTTATCGTGCTCTTCTTCGTCTCCTCTCTCACCTTTCTGACTTCAACGCTTCACTTCAAACGCCAACTCAACCCCTCAACATTCCTGATAATGACAGTGGTAGAATGGATCAAGAAAACCTGGAAAAGGAGCCTAAGTGCTCTGAAGTTGTTGATTCTGATTGTTTGGATCCCGAGGATCCTATATACAAGGAGAGTATACAGGAGGTCAAGGAGACCATTGAAGGAGATGGAGATAAGGATATGGACTTGACTTCCAACAAGATGGTCCTAGATGATATAGAACGTATGATGGGAACAGAGGAAATGTCTACCCAAGTAAATAGTTTTGATGAGGAGCAAAAGCTAATGAATGAGTTTGAGCGGGTTATGAAAGGAGCTGAAGATATTTTTAGTGATAGTGATTTAATCCCTCTGAGCTTGGAATTAGATGAGATTCATGAGAAACATAATGATGACTTTGAAGTTGGGTTGCCAGAGGCGGATTACCAAGTAGACATGGAAGAGGGAGAAATTTCTGGAGCCTTGGGAATAGATGGCAATTCACTTGATGTGTCTTCTGCAGATGCTTTAATTTTACAACAGATGGAAGTAGATGAGGTCCAGAAGCCTGGAAATGTAACTGGAAACATGATATATCCTTCTAAGAATCAAAATCAAGAAAAGAAAGAAGGCCTTGACCCTAATTCATCTATGGTAAATGTGCTTCAAGATGCCAATAATAGTGGACAAGTGGAGCCTAGAACTAGTAGCAAGGAAGGGATTGCATGCAGAGTTGGAGTAGGAATTTCTCAAGAAACTATTGAAGGTGAGAAAGAAGATAAAACAAAGTTGGTTGATATCAGCCAAAAGAGTAAGCGTGGTGGGAGTAAAGAAAAAAAGAAGATAAGAAAAAAAAAGAAGCGAGCTGAAAAGAACAAAGAACTGGGTGTTAAAAAATTGCAGCTGAAGCAACATGTACAAAAACCAAAAGTCATCCCACATTGTTGGCATTATCTCAATGGAAGGTGTCACGAGGGTGACAAGTGTAAGTTTTCCCATGATATAGTGCCCCTAACAAAATCCACGCCATGTACCTACTTTGCTCGTCACTCTTGCATGAAAGGGGATGATTGCCCATTTGATCATCAACTCTCTAAATATCCTTGCACCAATTTTGTGTCCAAAGGTTCTTGTACTAGAGGTGCTTCTTGCTTATTTGCACACCAGGTACCATCCAACAAAGATATCCCTACTCCTTTATTAGGAGGACATGCAAATTCCACTACACCACGTAACAACAAACGTGGTTCTAGTTCTGTCCGGCAAAACCATGACATGAATTCTGCTGGAAACCATTTTTGCATCAATGCTGAACATAATGTGACAAACACTGTAGAGAAACAGCCTACACCACCTAAAGGAATTAATTTCATCAATTTGGCAAAATTATCACCTAGTCCTAGTTCACTGAAACAAGGCACAGTAACAACTGAGGTAGGTCCTGCACCAATTGGGACCCATGAAGATCAAAGTTCATATGACAAAACTCAAAAGAAGGTGGAAAAGAAATTGCCAGCTGTGACACCTAAGGGAATAAATTTTCTTTCTTTTGGCAAAGGCTCAGTATGCAGTTTTCAAAGTGCTACTTATTCCAATGTGAATAGGGAAAATGCTATCAAGTTGCCCCAGTTTCTCAATTTTGGTTTGCCTGAGCAGGCCAATTCCTCTCTAAATAAGGATGATCAAAACAAAGCTAATGACAGAACAAAACAAAATGTGTCAATGACTGATGTATTCTTAAGCCAGATTTTAGGAAAAACTCAATCTGTGGCAAAAGGAATGACATCAAAGTTTCCAGAGAAATCCTCAGTAGATGTTTTCATGAGGGATCACAGCCATGGTAAATCAGTTCAAGAGGGGAAAAAGTCATCTGATAATTCTCAGAGTTCAAAAGGCCAAAAGGCATTCTTTTCAACTTTAGCATTTGCAGCGGAGCATGAATCTGCCATTAAGATGAAGTACCCTACTAATGGTTAGCTGGTATGAGCAGAGGACTCTGAAAGAACGTTCTGTTGAAGTTTCAAAACAAGGCACTTCCCAATTTAGTTGATGACAATTGATACTAGGCAGTTGTTTAGTAATAATGTACCGTGCAGTAGTCTTTCAGCAATTTTCTGTTGCTATTTATGGAATATCTATAGTAAGTGTATATTGCTGTTCATTTTTTGTTTTCCACTGCTATGCACACAGCCAAAGCTCATCTTAAAAATGTATAAGGTTTTCCTCCGCTGATGCATCATACAAATTTCATTTGATCTTCTCTCCATGCCTTGTAATTTTTTTTATAAAAAATATATTGAAGCATCATGATTCC 2563 0.3937 MRKFLAFPKRHKYRHSLQNDTCKHCDSLIHHSSPKRQSAPKGNSEMETSKPSQSAMDFPPYHRSHLRSNTYRALLRLLSHLSDFNASLQTPTQPLNIPDNDSGRMDQENLEKEPKCSEVVDSDCLDPEDPIYKESIQEVKETIEGDGDKDMDLTSNKMVLDDIERMMGTEEMSTQVNSFDEEQKLMNEFERVMKGAEDIFSDSDLIPLSLELDEIHEKHNDDFEVGLPEADYQVDMEEGEISGALGIDGNSLDVSSADALILQQMEVDEVQKPGNVTGNMIYPSKNQNQEKKEGLDPNSSMVNVLQDANNSGQVEPRTSSKEGIACRVGVGISQETIEGEKEDKTKLVDISQKSKRGGSKEKKKIRKKKKRAEKNKELGVKKLQLKQHVQKPKVIPHCWHYLNGRCHEGDKCKFSHDIVPLTKSTPCTYFARHSCMKGDDCPFDHQLSKYPCTNFVSKGSCTRGASCLFAHQVPSNKDIPTPLLGGHANSTTPRNNKRGSSSVRQNHDMNSAGNHFCINAEHNVTNTVEKQPTPPKGINFINLAKLSPSPSSLKQGTVTTEVGPAPIGTHEDQSSYDKTQKKVEKKLPAVTPKGINFLSFGKGSVCSFQSATYSNVNRENAIKLPQFLNFGLPEQANSSLNKDDQNKANDRTKQNVSMTDVFLSQILGKTQSVAKGMTSKFPEKSSVDVFMRDHSHGKSVQEGKKSSDNSQSSKGQKAFFSTLAFAAEHESAIKMKYPTNG 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01356 741 MobiDBLite consensus disorder prediction 32 55 - -
Pste7g01356 741 SMART c3hfinal6 421 447 IPR000571 GO:0046872
Pste7g01356 741 SMART c3hfinal6 449 473 IPR000571 GO:0046872
Pste7g01356 741 SMART c3hfinal6 391 418 IPR000571 GO:0046872
Pste7g01356 741 SUPERFAMILY CCCH zinc finger 393 417 IPR036855 GO:0046872
Pste7g01356 741 MobiDBLite consensus disorder prediction 341 356 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 485 514 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 357 374 - -
Pste7g01356 741 ProSiteProfiles Zinc finger C3H1-type profile. 392 419 IPR000571 GO:0046872
Pste7g01356 741 MobiDBLite consensus disorder prediction 88 103 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 88 113 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 28 63 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 635 654 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 694 715 - -
Pste7g01356 741 ProSiteProfiles Zinc finger C3H1-type profile. 421 448 IPR000571 GO:0046872
Pste7g01356 741 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 229 736 IPR045124 GO:0003723|GO:0045892
Pste7g01356 741 Gene3D - 381 449 - -
Pste7g01356 741 ProSiteProfiles Zinc finger C3H1-type profile. 451 474 IPR000571 GO:0046872
Pste7g01356 741 Pfam CCCH-type zinc finger 396 417 IPR041367 -
Pste7g01356 741 MobiDBLite consensus disorder prediction 341 374 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 550 577 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 478 514 - -
Pste7g01356 741 MobiDBLite consensus disorder prediction 281 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01356 Pste-Chr7 12298911 12304217 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste7g01356 zf-CCCH_4 5.3e-07 CL0537