Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01337 ATGGGTAGCGAAGAAGAGAGGGTTCTTGAGAACCAACTGGAACTTCAATTGCAAGAACAAAGGGATTCTCTCTCTGCTATAGATCAAGCTCTTCTCTCTGATCCAACTAACCCTGAGCTTCTCGCGGTTCACGAGGAGCTTGTTCAGGTAATTAAGGATGCAGAAGAAGGCCTTTTTCACCTAAAACGTGCACGGTTGTTACAAGAAGCAGATTCAGTGCTGAGTAACACTAATATTTTTACTGAAGAAGAGAAAGCGGAGCCCCTTGATCCCACAGATGTTGAACCAGAGCCATTGGAGGAAAAATGTTATTCTGTTGGATCTAAGTGTAGATTCCGTCACAAAGATGGGCGTTGGTACAATGGTCAAGTGGTACAGTTGGATAATTCAGTGGCAAAAGTTTCATTCCTTACTCCTACTTCTGAGAATATGCTGAACACCCAAGTGCAGATGTGCAAGTTCTTTTTACAACAACGATGTCGATTTGGTAGTAACTGTCGCCTATCACATGGAGTTGATGTTCAATTATCTGCTCTTAAAAAATATGTCCCTACAATCTGGAAGCAGTCCCTTGTGGGGTCAAGTATATGGGCTATCTCAACTGCAAATGCAGGCACTTGGAAAGAAGCCGAGCTTGAGTCCTGGGATGAAGGGGTTGGAGTTGGACAAGTTGTGTTCCGAGATGATGGAAGTTCTGTGAAACTTGGAGCAGAAGAAATGGCACTGTCTGAGCATGCAGAAGTCAGTGACTTGGAGAGTGATTCAAGCTTAGAACAATCTGATTCCAGTGACTACGAGGAGGAGGAGGAGGAATCACAAGGTCTAGGATTTCTGGAAAGTACCAACCTACAGAGAGGTATTCAAACTGAAACTGCAACATTTGCTACGTGGGAGAACCACACTAGAGGCATAGCTTCCAAAATGATGGCTAATATGGGGTACAGAGAAGGAATGGGTTTAGGTGTAACTGGTCAGGGAATGCTGGACCCCATACCAGTGAAGGTGCTACCACCAAAGCAGTCCTTAGATCATGCACTCGAGTCTCATAAAAGAGAAGAGAACAAAGAGAAGCAAGCCAACAAGAAACGGAGTCGAGGTGGCAAGAGAAAACGTGAAAAGAAATTTGCAGAAGCAAATCGAGCATCAAAAGAGGAAGAAGAGTCAGCATCAGATGTCTTTGCATTAATAAACAATCAGTTGGCAATGCACAGTGAGACTTTTGGCAGTGGATCAACAAAGAAGCAGCAAAGTAAAGCTTATGAGGAAGGTAAAAAGGTGGATAGACGGGCACTGGTTGCTTATCAGGAAGAGGTGAAGGATTTGAAGATGAGGGTTGAAAAGCTTGAGCACATTGTGAATGTCAATAAGAAAGAGAAGGCTGTATATGAGGCTGCTATGAGGAAATTAAATGAAACCCGCAAGGCTTTGGCAGATGCTGAAGCAGTTCATGCTTCTGCCTCAAATGCAGTTGTCAGCAAAGAAAAAGAGAAGAGATGGCTCAAGTTTTAGTTAGGAGTCAAAACTCAGTTATGTTTTTAGTTGCATGATATATTGTCTTTAGTTTATGCTGATGACCTTAAAATGAAAGAGAAAAAGGAAAGGAGATTTCAAAATGTGTAGCTCAATTAAGATATTAGTACATTGCACTTTTATATGCAATCTTGTACATCTTATTCAATTACTCAGTTGCATGATGTATGCACGATTTTGTATCAAGTCCTTGTGTCTTTAACTGTTTCATTTGCCTTGTTTAGAAGGTTAAGGTTGTATTAGTTTTTGCATTAAATCACTTTGAATGTTGAAGTTATATCTTAAAATTACAGTTAATATGCTCTGGAATGTGCGATTTGTGTAACACCACCATTGATACCCTA 1874 0.4114 MGSEEERVLENQLELQLQEQRDSLSAIDQALLSDPTNPELLAVHEELVQVIKDAEEGLFHLKRARLLQEADSVLSNTNIFTEEEKAEPLDPTDVEPEPLEEKCYSVGSKCRFRHKDGRWYNGQVVQLDNSVAKVSFLTPTSENMLNTQVQMCKFFLQQRCRFGSNCRLSHGVDVQLSALKKYVPTIWKQSLVGSSIWAISTANAGTWKEAELESWDEGVGVGQVVFRDDGSSVKLGAEEMALSEHAEVSDLESDSSLEQSDSSDYEEEEEESQGLGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALESHKREENKEKQANKKRSRGGKRKREKKFAEANRASKEEEESASDVFALINNQLAMHSETFGSGSTKKQQSKAYEEGKKVDRRALVAYQEEVKDLKMRVEKLEHIVNVNKKEKAVYEAAMRKLNETRKALADAEAVHASASNAVVSKEKEKRWLKF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01337 502 Pfam CCCH-type zinc finger 151 171 IPR041367 -
Pste7g01337 502 MobiDBLite consensus disorder prediction 346 389 - -
Pste7g01337 502 Coils Coil 431 451 - -
Pste7g01337 502 Coils Coil 462 482 - -
Pste7g01337 502 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 502 - -
Pste7g01337 502 ProSiteProfiles G-patch domain profile. 301 347 IPR000467 GO:0003676
Pste7g01337 502 SMART c3hfinal6 146 172 IPR000571 GO:0046872
Pste7g01337 502 Coils Coil 342 362 - -
Pste7g01337 502 MobiDBLite consensus disorder prediction 244 282 - -
Pste7g01337 502 MobiDBLite consensus disorder prediction 371 389 - -
Pste7g01337 502 SMART G-patch_5 299 345 IPR000467 GO:0003676
Pste7g01337 502 Gene3D - 120 183 - -
Pste7g01337 502 MobiDBLite consensus disorder prediction 257 274 - -
Pste7g01337 502 ProSiteProfiles Zinc finger C3H1-type profile. 146 173 IPR000571 GO:0046872
Pste7g01337 502 Pfam G-patch domain 301 343 IPR000467 GO:0003676
Pste7g01337 502 MobiDBLite consensus disorder prediction 346 360 - -
Pste7g01337 502 SUPERFAMILY CCCH zinc finger 147 171 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01337 Pste-Chr7 12132064 12143036 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste7g01337 G-patch 1.2e-11 CL0449