Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01335 GAAAGATTGAAAGGTCATTACATTACAGCCACAGCCGAGAAACCCACAGGGAAAGGAAAGAAAGAGAGAAAGAAAAAAAAGGTCAAAGGCTGCAACTTTTCTCCGCCAATCTCACATTTTTCAACGTTTTGCCGTCCTGTTTGGCTTTCTGGGTCGTCTTGCAATCCAAAAAAGATTCCAACTTTGAAGATGGGTAGGGGTGGAACCGCCGCGGCGGGCGAGATCGCCGAACCGGGTTCAAGGCCTGTTTTTTTCAAAGAACCACGGTACAGGGGCGTCAGAAAAAGACCATGGGGCCGGTTTGCCGCGGAAATCAGAGACCCTTTGAAGAAAACAAGGGTTTGGCTTGGAACATTCGACACGGCCGAAGAGGCGGCGCGTGCCTACGACACGGCGGCGAGAACACTCCGGGGATCCAAGGCCAAGACCAATTTCCCCCTCTCGCCGCCGTTCTACCACCCGGATCCGTTTTCTGACCACCGTTATTTTGCCGGCACCGGCGAAGACTTTCACGATCACCGGAGACCAACCTCCAGCGGGATGAGCAGCACCGTCGAGTCCTTTAGCGGCCCGCGCCCCGCTGTACCTGCGTCCGCTCCGCCGCCATCTTCCCGAAGATATCCCCGGACGCCGCCGGTCGTTCCCGAGGACTGCCGCAGCGACTGTGACTCGTCTTCCTCTGTCGTCGACGATGGTGATGGCGAGAACGTGGCTTCATCGTTCCGTCGAGAACCATTGCCGTTTGATCTTAACGCTTTGCCGTTAGACGATGCTGATGTGGCAAACGACGACCTGTTCTGCACCGTTCTTTGCCTCTGA 819 0.558 ERLKGHYITATAEKPTGKGKKERKKKKVKGCNFSPPISHFSTFCRPVWLSGSSCNPKKIPTLKMGRGGTAAAGEIAEPGSRPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKTRVWLGTFDTAEEAARAYDTAARTLRGSKAKTNFPLSPPFYHPDPFSDHRYFAGTGEDFHDHRRPTSSGMSSTVESFSGPRPAVPASAPPPSSRRYPRTPPVVPEDCRSDCDSSSSVVDDGDGENVASSFRREPLPFDLNALPLDDADVANDDLFCTVLCL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01335 272 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Pste7g01335 272 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Pste7g01335 272 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 235 - -
Pste7g01335 272 FunFam Ethylene-responsive transcription factor 2 89 147 - -
Pste7g01335 272 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Pste7g01335 272 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Pste7g01335 272 MobiDBLite consensus disorder prediction 194 209 - -
Pste7g01335 272 MobiDBLite consensus disorder prediction 1 29 - -
Pste7g01335 272 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Pste7g01335 272 MobiDBLite consensus disorder prediction 164 239 - -
Pste7g01335 272 CDD AP2 88 148 IPR001471 GO:0003700|GO:0006355
Pste7g01335 272 Gene3D AP2/ERF domain 89 148 IPR036955 GO:0003700|GO:0006355
Pste7g01335 272 SUPERFAMILY DNA-binding domain 89 148 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01335 Pste-Chr7 12106941 12108073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01335 62 272 AP2-EREBP Transcription Factor Family AT1G50640 57.759 2.64e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g01335 AP2 5.1e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01335 7 12106941 12108073 Pste7g01335 7 12106941 12108073 ECH