Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01328 CTAAAATTGAGAGGCCCATGGTATTTGCTGTGCCGCGCGACCACTGCATCTGGGCGTGTGTTCTGCGAGGAGCCTCTTAATCTCACTTTTCACACTTATTGCCACTCTCACACTCTCTGTTTTCCCTTCCCTTCTCATAACGCGCAAATTTCTTGCATTCCCAAAACGACACAAGGATCATGATTTTCTCCGAAACGACACAGCGCCCCAAAGGCAACTTCTGAAATGGAAACCTCAAAACCCTCTGAATCCGCAATGGATTTCCCTCCCTACCGTCGATCACACTTGCGTAGCAACACTTACCGTGCCCTTCTTCATCTCCTCCCTCACCTTTCTGCCTATAACGCTTCACTTCAAGCGCCAACTCAACCCCTCAACATTACTGATAATGGCAGTGGTAGCATGGATCAGGAAAACCAGGAGAAGGAGCCTAAGTTCTTTGAAGTTGTTGATTCTGATTGTTTGGATCCCGAGGATCCTATATGCCAGAAGGATATACAGGAGGTCAAGGAGACCATTCAAGGGGATGCAGACAAGGATTTCGATTTGACTTCCAGCAAGATGATCCTAGATGATATAGAAGATATGATGGGAATAGAGGAAATGTCTAACCAAGTAAATGGTTTTGATAAGGAGCAGAAGCTAATGAACGAGTTCGAGCTGGCTATGAAAGGAACTGAAGATATTTTTAGTGATAGTGGTTTAATCCACCTGAACTTGGGATTAGATGAGAAACATAATGATGGCTCTGAAGTTGTGTTGATGGATCACCAAGAAGACTTGGAAGAAGGAGAAATTTCTGGAGACTTGGGAATGAATAGCAATTCATTTGATGTGCCTTCTGCAGATACTTCAATTTTACAACAGATGGAAGTAGGTGAGGTTCAGAAGCCTGAAAATGTATCTGGAAACGTGATATATCCTTCTAAGATTGAGAATCGAGAAAAAGAAAAAGGCTATGGCTCTAATTTTTCTATGGTAAATGCACTCCAAGATGTCAATAATAGTGGACAGATGGAGCCTAGAACTAGTGGCAAGAAAGGGATTGCATGTGGAGTTGAAGTAGCAACTTCTCAAAAACCTATTGAATATGAGAAGGAAGATAAAACAAAGTGGGTTGAAGCCAGCAAAAAGAGTAAGCGCGCTGGGAATAAAGAAAAAAAGAAGATAAAAAACAAAATCAAGCTAGCAAAAAAGAACAAAGAACTAGGTGTTAAAAAATTGAAGTTGCAGCAACATGTACAAAAACCAAAAATTGTCTCACATTGTCGCCATTATCTCATTGGAAGGTGCTACGAGGGTGACAAGTGTCAGTTTTCACATGATACAGTGCCTCTAACAAAATCCAAGCCATGTACTTACTTTGCTCATCACTCTTGCATGAAAGGGGATGATTGCCCATTTGATCATCAGCTCTCAAAATATCCTTGTAACAATTTTGTGTCCAAAGGCTCTTGCACTAGAGGAGCTGCTTGCTTGTTTGCACACCAGGTACAATCCAACAAAGATATCCCTACTCCTTCATCATTACATGCAAATTGCACTACACCACTTAACAACAATCATGGCTCTAGTTCTGTCCAGCAAAACCGCTTCACGAATTCTGCAGGAATTCATTCTTGCGTCAATGAACATAAGGTGACAAACACTGTGCAGAAACAGCCTATACCACCTAAAGGAATTAATTTCATCAATCTTGCTAAATCATCACCCAGCCTTAGCTCACTGAATCGAGGCACAGTAACAACTGAGATAATAACTCCTGTCAAAATTGGGACCCGTGAAGATCAAAGTTCATATGACAAAACTAAAAGCAGTGCGGAAAAGAAACTGCCAGTTGTGACACCTAAGGGAATAAATTTCCTTTCTTTTGGCAAAGGCTCTGTATGCAGTTTTAGAAGTGCTACTCATTCCAATGTGAATAGGGAAAATGCTATAAACTTGCCCCAGTTACTCAATTTTGGTTTGGCTGAGCAGACCAATTCCTCTCTAAATAAGGATGATTACAACAAAGCTAGTGACAGAACTAAACAAAACGTATCATGGTCTGATATATTCTTAAGTGAGATTTTAGGAAAAAGTAAATCTTCGGCAGAAGGGATGACATCAAAGTTTCAAGAGAAAATCTCAGTAGATGTTTTAATGAGGGATCACAGCCATAGTAAATCAGTTCAAGAGGGGAAAAAGTCATCTGATACTTCTCACGGTTCAAAAGGCCAAAAGGCATTCTTTTCAACTTTAGCATTTGCAGCAGAGCATGAATCTGACATTAAGATGAAACACCCTACTGGTACAATCAAAGGACTCTGAAAGAAAGTTTTGTTGAAGTTTTAAAACAAGGAACTTCCCAATTTAGTAGATGATAACTAGATTGTTGGTTAGTTATGTGCGGTGGGCGGTTCTATGGTCTGTCAGCAATTTTACTATGGAACTGTTACTTTTCTATTGCAGCTTGATTGAATTTGAATGTATAATAGTACTTATTTACGGTCCATGGAACCTCAATGGCAAATGTATATCCATGTGCATCTTTTTTTTTTTTTTTTTTATCTATGCTGATGCACACAGCTAATCCTCACCTTCCAAATTTCATTAGATCTTTCATACCTTGTCTTGTACCTTTTTTTTTAATACAAAAACATATTGACGCATTGTATATACCATGATTCTATCAAC 2676 0.3954 METSKPSESAMDFPPYRRSHLRSNTYRALLHLLPHLSAYNASLQAPTQPLNITDNGSGSMDQENQEKEPKFFEVVDSDCLDPEDPICQKDIQEVKETIQGDADKDFDLTSSKMILDDIEDMMGIEEMSNQVNGFDKEQKLMNEFELAMKGTEDIFSDSGLIHLNLGLDEKHNDGSEVVLMDHQEDLEEGEISGDLGMNSNSFDVPSADTSILQQMEVGEVQKPENVSGNVIYPSKIENREKEKGYGSNFSMVNALQDVNNSGQMEPRTSGKKGIACGVEVATSQKPIEYEKEDKTKWVEASKKSKRAGNKEKKKIKNKIKLAKKNKELGVKKLKLQQHVQKPKIVSHCRHYLIGRCYEGDKCQFSHDTVPLTKSKPCTYFAHHSCMKGDDCPFDHQLSKYPCNNFVSKGSCTRGAACLFAHQVQSNKDIPTPSSLHANCTTPLNNNHGSSSVQQNRFTNSAGIHSCVNEHKVTNTVQKQPIPPKGINFINLAKSSPSLSSLNRGTVTTEIITPVKIGTREDQSSYDKTKSSAEKKLPVVTPKGINFLSFGKGSVCSFRSATHSNVNRENAINLPQLLNFGLAEQTNSSLNKDDYNKASDRTKQNVSWSDIFLSEILGKSKSSAEGMTSKFQEKISVDVLMRDHSHSKSVQEGKKSSDTSHGSKGQKAFFSTLAFAAEHESDIKMKHPTGTIKGL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01328 694 MobiDBLite consensus disorder prediction 642 663 - -
Pste7g01328 694 ProSiteProfiles Zinc finger C3H1-type profile. 371 398 IPR000571 GO:0046872
Pste7g01328 694 ProSiteProfiles Zinc finger C3H1-type profile. 401 424 IPR000571 GO:0046872
Pste7g01328 694 SUPERFAMILY CCCH zinc finger 343 367 IPR036855 GO:0046872
Pste7g01328 694 Gene3D - 331 399 - -
Pste7g01328 694 SMART c3hfinal6 399 423 IPR000571 GO:0046872
Pste7g01328 694 SMART c3hfinal6 371 397 IPR000571 GO:0046872
Pste7g01328 694 SMART c3hfinal6 341 368 IPR000571 GO:0046872
Pste7g01328 694 ProSiteProfiles Zinc finger C3H1-type profile. 342 369 IPR000571 GO:0046872
Pste7g01328 694 Pfam CCCH-type zinc finger 347 367 IPR041367 -
Pste7g01328 694 Coils Coil 305 325 - -
Pste7g01328 694 MobiDBLite consensus disorder prediction 642 660 - -
Pste7g01328 694 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 171 692 IPR045124 GO:0003723|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01328 Pste-Chr7 12038058 12043134 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste7g01328 zf-CCCH_4 2.1e-06 CL0537