Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01309 ATCTAACTAGCTCCTTCTTGGACGTTAATATTGATCTGTATGATTTTTCAATGAAAAACAACAGAACTAGTAACTTTTAAAATGAATTTCGTGTGCCTTTTTTTGGAATTATCTTCAGCTACAAAGCTAGGTCCTTATTTAGTTTGTTTTTGGTTGGAAACTTCTGCACTTATTTTTTCTAATTTTCATGACGCTATGAAAGTAAACCTTCAATTGTTTCTATGTTACAGGGTCAAGTAGGTCCAAATGCTGGAAGGTGAGCGAGTTTTAAACTTTGATTGGAGATATTCTAACTAGGAGAACATTTTTAGTTTGCATTTTAGAGTTAACTGCTTCACTTCTTGGTTATCCAATTGTTAGCAAGGGCAAGGAAATAAATAACTTGAAAATGGTGTTTGAAACTGTAACTTGTACATGATAAACTACCATCATTTGTTTTATATTAGTAGTTGATATGATTTGTTTATTTGTTTCCTTATTTTACTTTCTTTCAGTCTATGTTTGTGCCTTTGAGCTTCTTGTTCCAGGAATTGGTGTGGCTAATATGTAATGTCAATGTTCAGAACTTTGAATCAGGAGGGTGATGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCATACAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATACCACATCTCTAAAAGGTGTAGGCTTCAACCTGACAATGACATATACAGAGATCAAGAGCAACATAAGTTTCATATAGATATAAATGAATGGCAATGTGGGTACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTCGATCAGCATTTTGACAACAGACACTCCAATTTGCTTAATTCGAGTGAAAGCCAGTGCTTAGCAGATGTATGTGGTGCCCTGCACTGTGACCATGAAATGAATTCTGGATCGAAAAGGACAAAGTGCAATCCTGCTGCAGCAGCAAGAAATAAACACCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCAGTCAATGAGGGCCCTGCAGCAAGCCGGCTTCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGAGGGCGTAGGAAGAAGAAAAATGTGTTCTACATCTTTGTGTCCATTTTTCTTGTGATACTGCTGATTCTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAGGGAAGCTCAAGTGCTGAAGCGCATGTCTCAAAGCAGCAGAAAGAAAAAGCCATCCTAATTGATTGTTCTTTCCACAAAGAAGTTCACTACCTACATTTTCAGAAAGTAAAGATGTCACTAATTGATAGTGTGAACTGCACGTGAACTCAACCTACATTTTCAGAAAGTAAAGGTGCGACTAATGGATACAGTGTGATCTGCGCCTCAAGTCTTGTTTTCGCAATTCTGCTATTTTCAAGTGTACGTTTGAAGGCAGAAAGAGATTGTCAACTTCAAAAATGACTTCTATGTGATCTGCTAGTTTGTAAACCGAATTCTTGTAAACTTTGAACAAAAAAGGGCGGCGTGACTGAATCCACCTCAGTTGGCTATTTGCATTTGATTGTGAATCACATCACTAACGAGAGAAATAACATGTAACATTTGCTATATATTCTCTTAATTTGTTTACTGACTTAATCTGGATTTATTATGTAGCTTTTCAC 1696 0.3644 MSMFRTLNQEGDDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCRLQPDNDIYRDQEQHKFHIDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNSSESQCLADVCGALHCDHEMNSGSKRTKCNPAAAARNKHLCESLADSCFPVNEGPAASRLHEFFLHQFCDAHSCTGSRKPFSRGRRKKKNVFYIFVSIFLVILLILYYLYIYLYQRGMKREAQVLKRMSQSSRKKKPS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01309 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 98 IPR013087 -
Pste7g01309 239 PANTHER ZINC FINGER PROTEIN-RELATED 9 238 - -
Pste7g01309 239 ProSitePatterns Zinc finger C2H2 type domain signature. 75 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01309 Pste-Chr7 11824448 11827810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01309 5 239 C2H2 Transcription Factor Family AT5G63280 59.664 2.61e-105 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste7g01309 None None None