Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01297 ATGGAGGGTATGGCAAGTATTAATGATGCAGCCAATGGTGAAAATGGGTTGCTAGTAATGTTTGGTGGCAATGAAAGCAGTGGCAATGTGGAGAAGGTGACTCTGAAGAAGGGTCCTTGGACAACTACAGAGGATGTTGTTCTCATAGATTATGTGACAAAGCATGGTGAAGGCAATTGGAATGCAGTGCAGAGGAACACTGGGTTGAATAGATGTGGGAAGAGTTGTAGGCTCAGATGGGCTAATCATTTGAGGCCTAATTTGAAGAAGGGTGCCTTCTCCCCTGAGGAAGAGACGGTCATTGTTGATTTTCATGCACAGTTTGGCAACAAATGGGCCAAAATGGCTGTTCTGTTGCCCGGGAGAACAGACAATGAAATCAAGAACTACTGGAACACAAGGATCAAACGCCGCCAAAGGCAGGGTATCCCCCTCTATGCAAACAAACATGATCACCATTGTTCCACAACACCAACCACTCACACCAGCCCTTCTCCATTTCTCACCACAGTAAGATCAAACCCCAACTTCGCCACAAATTTTGAGTTCTTCAACCAAAACCAAGAGCATCACCACCAATACCAACAACAACAACAACCTTTATCTCCAACTGCACTACATCATTCCCCTCTAGAACACAAACCCTTCACCTCTTCATCACCTCACACTTTCCTAGACCATTCACCTCTTCCATTCTCATCTTATTCAACCTCTCCTCTCTCCTTCACCTTCCAAAGACGAGCTCCAATGCTATGCACCCCTCTTCAGTTCAAGCGCTACCGTACCTCTCCAAGCTACAATCTCCTCCCTGACCCTCCTCTCACCACCCAATTCCCTCACCTTGATGGCTTCCAGTTCCCAATATCTTCAAGTTCTTCTCAGTTTTTTCTGCCCTCTTTGTTAGAATCTGATCAAGGTGTTTCCTCTTCTGCTTTCCAACCCAAGTTAGAGCTCCCTTCAAACCAGTTTTATAAACCACCCCAAGAGCAAGACTTTAAGCTTGACGCTGAGTTCAATGATCCTTCTTTTCAAACTAGTAGTGACACTCTGAAGGATCTTCTGTTGGAGGCTCAGGCACTGGCTTCAGGCCAGAACTCAAATAAACGAGGTTATTTGTGTTTGAATGAGGACAATGATGTATTTGATGCATGCCAAAGCTTTGAGGATTTTCCAACTAGCTCTCTTTATTGGCCTTCCACTTGA 1203 0.4514 MEGMASINDAANGENGLLVMFGGNESSGNVEKVTLKKGPWTTTEDVVLIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSPEEETVIVDFHAQFGNKWAKMAVLLPGRTDNEIKNYWNTRIKRRQRQGIPLYANKHDHHCSTTPTTHTSPSPFLTTVRSNPNFATNFEFFNQNQEHHHQYQQQQQPLSPTALHHSPLEHKPFTSSSPHTFLDHSPLPFSSYSTSPLSFTFQRRAPMLCTPLQFKRYRTSPSYNLLPDPPLTTQFPHLDGFQFPISSSSSQFFLPSLLESDQGVSSSAFQPKLELPSNQFYKPPQEQDFKLDAEFNDPSFQTSSDTLKDLLLEAQALASGQNSNKRGYLCLNEDNDVFDACQSFEDFPTSSLYWPST 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01297 400 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
Pste7g01297 400 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
Pste7g01297 400 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Pste7g01297 400 FunFam MYB-related transcription factor 36 89 - -
Pste7g01297 400 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 369 - -
Pste7g01297 400 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Pste7g01297 400 CDD SANT 39 84 IPR001005 -
Pste7g01297 400 SMART sant 36 86 IPR001005 -
Pste7g01297 400 SMART sant 89 137 IPR001005 -
Pste7g01297 400 CDD SANT 92 133 IPR001005 -
Pste7g01297 400 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Pste7g01297 400 MobiDBLite consensus disorder prediction 188 211 - -
Pste7g01297 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 139 IPR017930 -
Pste7g01297 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 88 IPR017930 -
Pste7g01297 400 MobiDBLite consensus disorder prediction 188 205 - -
Pste7g01297 400 FunFam Transcription factor GAMYB 92 138 - -
Pste7g01297 400 Gene3D - 36 89 - -
Pste7g01297 400 Gene3D - 92 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01297 Pste-Chr7 11746079 11747760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01297 35 197 MYB Transcription Factor Family AT2G32460 60.241 2.49e-66 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g01297 Myb_DNA-binding 2.6e-13 CL0123