Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01296 ATGGAGGGTATGGCAAGCATCAATGATGAAGCCGATGGTGAAAATGGGTTGCTAGCAACTTTTGGTGGTAATGAAAGTGGTGGCGGCGGTGAGGGCGGTAACAATGTGGAGGAAATGACTTTGAAGAAGGGTCCTTGGACAACTGCAGAGGATGCTGTTCTCATAGATTATGTGACAAAGCACGGTGAAGGGAATTGGAATGCAGTGCAGAGGAACACAGGGTTGAATAGATGTGGGAAGAGTTGTAGACTCAGATGGGCTAATCATTTGAGGCCCAATTTGAAAAAGGGTGCCTTCTCGCCTGAGGAAGAGAAGCTCATCATTGATCTTCATGCACAGTTTGGCAACAAATGGGCCAGAATGGCTGTTCTGTTGCCTGGGAGAACAGACAATGAAATAAAAAACTATTGGAACACAAGGATCAAACGCCGCCAAAGACAGGGTCTCCCTCTCTATTCAGACGATCACCATCGTTCCACAGCACCAACCACTCCCACCAGCCCTTCCCCAAGTCTCACTCCAGCAGGATCAAACCCCAACTTCGCCACAAATTTTGAGTTCTTCAATCAAACCCAACACCAAAACCAATACCAACAACAACCTCTATCTCCAACTACACCCCATTATTCCCCTCTCCAACACAGACCCTTCACCTCTTCATCACCTCACACTTTCTTAGACCCTTCACCTCTTTCATTCTCTTCCTCTTCACCCTCCCCTCTCTCCTTCACTTTCCAAAGACCAGCTCCAATGTTATGCACCCCTCTTCGCTTCAAGCGCTACCGTGCCTCTCCAAGCTACAACCTCCTCCCTGACCCTCCTCTCACCACCCAATTCCCTCACCTTGATGGCCTCAGGTTCCCAGTTTCTTCAGGTTTTTCTCAGTTTTTTCAGCCTTCTATGTTGGATTCCGATCGAGGTCTTTCTTCTTCTTCCTCTTCTGGTTTGCAACCCAAGCTAGAGCTCCCTTCAAACCAGTTTTATAAACCACCCCAAGAGCAAGACTTTAAGCTTGACATTGAGTTCAATGATCCTTCTTTTCAAACTAGTAGTGGCTTGTTGGGGGATCTTCTCTTGGAGGCTCAGGCACTGGCTTCAGGTCAGAACCCAAAGAAACGAGGTTACTTGAGTTTGAATGAGGGCAATGATGTGTTTGATGCATGCCAAAGCTTTGAGGACTTACCAACTAGCTCTCTTTACTGGCCTTCTACTTCAGCACCCAAACCAAAGGAAGAAACACCGGACTTTAGTAAATTCATGAATGATGACTTATCATCATTGCTTACAGTGATTCCATCTTCCAGTATGGAGGGTCATCATGAGTGGCACAATAATGGTGCCCCAGAAGTGTCCAATGTCCAATCCTCTGGTAGTGGCATGACAGATGACAATTTTGGACTTGATATCAAGCCTCTAGCTTCATTGTTTCCTCTCACCAACAACACCACAAACCATAATGAAAATCAAGGTTGCTACTCTTGGGACAATTTGCCTGGTCTCTGCTAA 1506 0.4641 MEGMASINDEADGENGLLATFGGNESGGGGEGGNNVEEMTLKKGPWTTAEDAVLIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSPEEEKLIIDLHAQFGNKWARMAVLLPGRTDNEIKNYWNTRIKRRQRQGLPLYSDDHHRSTAPTTPTSPSPSLTPAGSNPNFATNFEFFNQTQHQNQYQQQPLSPTTPHYSPLQHRPFTSSSPHTFLDPSPLSFSSSSPSPLSFTFQRPAPMLCTPLRFKRYRASPSYNLLPDPPLTTQFPHLDGLRFPVSSGFSQFFQPSMLDSDRGLSSSSSSGLQPKLELPSNQFYKPPQEQDFKLDIEFNDPSFQTSSGLLGDLLLEAQALASGQNPKKRGYLSLNEGNDVFDACQSFEDLPTSSLYWPSTSAPKPKEETPDFSKFMNDDLSSLLTVIPSSSMEGHHEWHNNGAPEVSNVQSSGSGMTDDNFGLDIKPLASLFPLTNNTTNHNENQGCYSWDNLPGLC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01296 501 SMART sant 95 143 IPR001005 -
Pste7g01296 501 SMART sant 42 92 IPR001005 -
Pste7g01296 501 MobiDBLite consensus disorder prediction 437 462 - -
Pste7g01296 501 Pfam Myb-like DNA-binding domain 96 139 IPR001005 -
Pste7g01296 501 Pfam Myb-like DNA-binding domain 43 90 IPR001005 -
Pste7g01296 501 MobiDBLite consensus disorder prediction 147 231 - -
Pste7g01296 501 Gene3D - 42 95 - -
Pste7g01296 501 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Pste7g01296 501 MobiDBLite consensus disorder prediction 447 462 - -
Pste7g01296 501 FunFam MYB-related transcription factor 42 95 - -
Pste7g01296 501 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 25 452 - -
Pste7g01296 501 SUPERFAMILY Homeodomain-like 40 137 IPR009057 -
Pste7g01296 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 90 IPR017930 -
Pste7g01296 501 Gene3D - 98 163 - -
Pste7g01296 501 FunFam Transcription factor GAMYB 98 144 - -
Pste7g01296 501 ProSiteProfiles Myb-like domain profile. 38 90 IPR001005 -
Pste7g01296 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Pste7g01296 501 MobiDBLite consensus disorder prediction 13 37 - -
Pste7g01296 501 MobiDBLite consensus disorder prediction 157 231 - -
Pste7g01296 501 CDD SANT 45 90 IPR001005 -
Pste7g01296 501 CDD SANT 98 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01296 Pste-Chr7 11737042 11739846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01296 18 177 MYB Transcription Factor Family AT4G26930 63.636 1.67e-68 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g01296 Myb_DNA-binding 2.2e-13 CL0123